Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.97■□□□□ 0.79
CPSF7Q8N684 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CPSF7Q8N684 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CPSF7Q8N684 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.97■□□□□ 0.79
CPSF7Q8N684 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 TERF1P2-201ENST00000583350 1212 ntBASIC19.97■□□□□ 0.79
CPSF7Q8N684 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.97■□□□□ 0.79
CPSF7Q8N684 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.97■□□□□ 0.79
CPSF7Q8N684 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF7Q8N684 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.96■□□□□ 0.79
CPSF7Q8N684 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CPSF7Q8N684 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.96■□□□□ 0.79
CPSF7Q8N684 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.96■□□□□ 0.79
CPSF7Q8N684 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CPSF7Q8N684 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF7Q8N684 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 AC011484.1-201ENST00000377652 1995 ntBASIC19.95■□□□□ 0.78
CPSF7Q8N684 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF7Q8N684 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.95■□□□□ 0.78
CPSF7Q8N684 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF7Q8N684 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF7Q8N684 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CPSF7Q8N684 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CPSF7Q8N684 AC055733.4-201ENST00000638462 1354 ntBASIC19.95■□□□□ 0.78
CPSF7Q8N684 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.94■□□□□ 0.78
CPSF7Q8N684 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.94■□□□□ 0.78
CPSF7Q8N684 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.94■□□□□ 0.78
CPSF7Q8N684 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CPSF7Q8N684 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPSF7Q8N684 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.94■□□□□ 0.78
CPSF7Q8N684 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
CPSF7Q8N684 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.93■□□□□ 0.78
CPSF7Q8N684 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.93■□□□□ 0.78
CPSF7Q8N684 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 NTF6G-201ENST00000591094 616 ntBASIC19.93■□□□□ 0.78
CPSF7Q8N684 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.93■□□□□ 0.78
CPSF7Q8N684 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 AC009237.3-201ENST00000393279 1427 ntBASIC19.93■□□□□ 0.78
CPSF7Q8N684 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPSF7Q8N684 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms