Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TTC9CQ8N5M4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TTC9CQ8N5M4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TTC9CQ8N5M4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 AC006015.1-201ENST00000429970 570 ntBASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 AL591742.1-201ENST00000604433 565 ntBASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC9CQ8N5M4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 AC007322.4-201ENST00000509611 723 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 AL162412.1-201ENST00000567129 965 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 MIR2861-201ENST00000636310 90 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 AC013268.1-206ENST00000638368 961 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 AC112229.1-201ENST00000639295 961 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 GABARAPL3-202ENST00000624044 1851 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 LINC01521-201ENST00000504184 1943 ntBASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC9CQ8N5M4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TTC9CQ8N5M4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms