Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM20Q8N5G0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 AC018695.7-201ENST00000624587 2492 ntBASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM20Q8N5G0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 AC093503.3-201ENST00000624917 2352 ntBASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 AC103702.1-201ENST00000548801 2630 ntBASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SMIM20Q8N5G0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SMIM20Q8N5G0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SMIM20Q8N5G0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 FEM1AP4-201ENST00000443167 1987 ntBASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SMIM20Q8N5G0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms