Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CRLF3Q8IUI8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 AC099778.1-201ENST00000568593 1911 ntBASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 AL358852.1-201ENST00000623174 1268 ntBASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CRLF3Q8IUI8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 AC012414.1-201ENST00000556676 535 ntBASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 MIR6084-201ENST00000622012 110 ntBASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.35■□□□□ 0.85
CRLF3Q8IUI8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.34■□□□□ 0.85
CRLF3Q8IUI8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CRLF3Q8IUI8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CRLF3Q8IUI8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CRLF3Q8IUI8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CRLF3Q8IUI8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.33■□□□□ 0.84
CRLF3Q8IUI8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.33■□□□□ 0.84
CRLF3Q8IUI8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms