Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VRK2Q86Y07 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VRK2Q86Y07 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK2Q86Y07 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.92■□□□□ 0.62
VRK2Q86Y07 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.92■□□□□ 0.62
VRK2Q86Y07 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK2Q86Y07 AC019069.1-201ENST00000610008 1333 ntBASIC18.92■□□□□ 0.62
VRK2Q86Y07 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VRK2Q86Y07 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VRK2Q86Y07 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 UBE2DNL-204ENST00000602536 740 ntBASIC18.91■□□□□ 0.62
VRK2Q86Y07 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.91■□□□□ 0.62
VRK2Q86Y07 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK2Q86Y07 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 SLC7A5P1-201ENST00000568957 537 ntBASIC18.9■□□□□ 0.62
VRK2Q86Y07 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 AC243732.1-201ENST00000612648 864 ntBASIC18.9■□□□□ 0.62
VRK2Q86Y07 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK2Q86Y07 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VRK2Q86Y07 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VRK2Q86Y07 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VRK2Q86Y07 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
VRK2Q86Y07 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VRK2Q86Y07 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
VRK2Q86Y07 AC092720.2-201ENST00000602388 1665 ntBASIC18.89■□□□□ 0.61
VRK2Q86Y07 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 AL162377.1-201ENST00000618844 1793 ntBASIC18.89■□□□□ 0.61
VRK2Q86Y07 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 NTF6G-201ENST00000591094 616 ntBASIC18.89■□□□□ 0.61
VRK2Q86Y07 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 MIR2861-201ENST00000636310 90 ntBASIC18.89■□□□□ 0.61
VRK2Q86Y07 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK2Q86Y07 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 AC112907.3-201ENST00000577781 2400 ntBASIC18.89■□□□□ 0.61
VRK2Q86Y07 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
VRK2Q86Y07 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VRK2Q86Y07 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
VRK2Q86Y07 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms