Protein–RNA interactions for Protein: Q6ZQX7

LIAT1, Protein LIAT1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIAT1Q6ZQX7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LIAT1Q6ZQX7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 PCDHAC2-203ENST00000615316 3011 ntBASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 AC121338.2-201ENST00000622535 1744 ntBASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIAT1Q6ZQX7 AC020907.5-201ENST00000624372 1936 ntBASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.19■□□□□ 0.34
LIAT1Q6ZQX7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 KRT87P-202ENST00000534226 1464 ntBASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 KRT18P11-201ENST00000435214 1283 ntBASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LIAT1Q6ZQX7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 RNF165-205ENST00000588679 2904 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AP006587.3-201ENST00000525742 1516 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AC007225.1-201ENST00000566331 1836 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AC016769.1-201ENST00000409132 1010 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AC137761.2-201ENST00000561729 223 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AC145350.3-201ENST00000569033 163 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 AP004607.4-201ENST00000530158 1459 ntBASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.17■□□□□ 0.34
LIAT1Q6ZQX7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LIAT1Q6ZQX7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms