Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SHC4Q6S5L8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.12■■□□□ 1.29
SHC4Q6S5L8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.11■■□□□ 1.29
SHC4Q6S5L8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 NTF6G-201ENST00000591094 616 ntBASIC23.1■■□□□ 1.29
SHC4Q6S5L8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SHC4Q6S5L8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 AC007322.3-201ENST00000426526 701 ntBASIC23.09■■□□□ 1.29
SHC4Q6S5L8 AC097381.1-201ENST00000429019 1296 ntBASIC23.09■■□□□ 1.29
SHC4Q6S5L8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 MYCNOS-205ENST00000641950 531 ntBASIC23.09■■□□□ 1.29
SHC4Q6S5L8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SHC4Q6S5L8 SMG8-203ENST00000578922 2178 ntBASIC23.08■■□□□ 1.29
SHC4Q6S5L8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.08■■□□□ 1.29
SHC4Q6S5L8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SHC4Q6S5L8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.08■■□□□ 1.28
SHC4Q6S5L8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms