Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 MIR5787-201ENST00000611784 55 ntBASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATPAF1Q5TC12 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 MIR935-201ENST00000401179 91 ntBASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 AP004607.4-201ENST00000530158 1459 ntBASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF1Q5TC12 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF1Q5TC12 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 PLK5-205ENST00000642079 1969 ntBASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.66■□□□□ 0.42
ATPAF1Q5TC12 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms