Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
VARS2Q5ST30 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VARS2Q5ST30 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VARS2Q5ST30 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARS2Q5ST30 AC079834.2-201ENST00000609776 1949 ntBASIC21.74■■□□□ 1.07
VARS2Q5ST30 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VARS2Q5ST30 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARS2Q5ST30 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VARS2Q5ST30 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
VARS2Q5ST30 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VARS2Q5ST30 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.73■■□□□ 1.07
VARS2Q5ST30 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
VARS2Q5ST30 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
VARS2Q5ST30 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VARS2Q5ST30 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.72■■□□□ 1.07
VARS2Q5ST30 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.72■■□□□ 1.07
VARS2Q5ST30 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.72■■□□□ 1.07
VARS2Q5ST30 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.72■■□□□ 1.07
VARS2Q5ST30 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.72■■□□□ 1.07
VARS2Q5ST30 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.72■■□□□ 1.07
VARS2Q5ST30 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.72■■□□□ 1.07
VARS2Q5ST30 AL024507.2-201ENST00000606070 2574 ntBASIC21.72■■□□□ 1.07
VARS2Q5ST30 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VARS2Q5ST30 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VARS2Q5ST30 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARS2Q5ST30 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARS2Q5ST30 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VARS2Q5ST30 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
VARS2Q5ST30 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
VARS2Q5ST30 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARS2Q5ST30 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VARS2Q5ST30 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.71■■□□□ 1.07
VARS2Q5ST30 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
VARS2Q5ST30 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.71■■□□□ 1.07
VARS2Q5ST30 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VARS2Q5ST30 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.7■■□□□ 1.06
VARS2Q5ST30 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.7■■□□□ 1.06
VARS2Q5ST30 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VARS2Q5ST30 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 KRT17P3-201ENST00000420566 1262 ntBASIC21.7■■□□□ 1.06
VARS2Q5ST30 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.7■■□□□ 1.06
VARS2Q5ST30 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.7■■□□□ 1.06
VARS2Q5ST30 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.7■■□□□ 1.06
VARS2Q5ST30 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VARS2Q5ST30 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARS2Q5ST30 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARS2Q5ST30 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 AL596275.1-201ENST00000423464 877 ntBASIC21.69■■□□□ 1.06
VARS2Q5ST30 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VARS2Q5ST30 AC233263.1-201ENST00000578059 224 ntBASIC21.69■■□□□ 1.06
VARS2Q5ST30 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VARS2Q5ST30 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARS2Q5ST30 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VARS2Q5ST30 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.69■■□□□ 1.06
VARS2Q5ST30 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VARS2Q5ST30 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
VARS2Q5ST30 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms