Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 Z99916.2-201ENST00000604037 246 ntBASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTCAP3Q53RY4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 AC133681.1-201ENST00000465482 601 ntBASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 MTDHP1-201ENST00000605323 784 ntBASIC18.36■□□□□ 0.53
KRTCAP3Q53RY4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 AP001412.1-201ENST00000608405 714 ntBASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRTCAP3Q53RY4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 GUSBP5-202ENST00000510805 1989 ntBASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.34■□□□□ 0.53
KRTCAP3Q53RY4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 AL135905.2-201ENST00000584934 1404 ntBASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms