Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ATP5G1P1-201ENST00000448724 379 ntBASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 AC010203.1-204ENST00000548782 407 ntBASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 KRT16P5-201ENST00000455284 522 ntBASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RSPO4Q2I0M5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RSPO4Q2I0M5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 FITM1-202ENST00000559294 800 ntBASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RSPO4Q2I0M5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 AL450487.1-201ENST00000426799 995 ntBASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RSPO4Q2I0M5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 DUSP5P1-201ENST00000441325 1139 ntBASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 LINC01238-205ENST00000567549 1107 ntBASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RSPO4Q2I0M5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms