Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SKP1P63208 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.43■□□□□ 0.7
SKP1P63208 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.43■□□□□ 0.7
SKP1P63208 AL589743.5-201ENST00000616611 1050 ntBASIC19.43■□□□□ 0.7
SKP1P63208 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SKP1P63208 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.43■□□□□ 0.7
SKP1P63208 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SKP1P63208 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SKP1P63208 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 CYP21A1P-202ENST00000354927 1481 ntBASIC19.42■□□□□ 0.7
SKP1P63208 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.42■□□□□ 0.7
SKP1P63208 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.42■□□□□ 0.7
SKP1P63208 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.42■□□□□ 0.7
SKP1P63208 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.42■□□□□ 0.7
SKP1P63208 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.42■□□□□ 0.7
SKP1P63208 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.42■□□□□ 0.7
SKP1P63208 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.42■□□□□ 0.7
SKP1P63208 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.42■□□□□ 0.7
SKP1P63208 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.42■□□□□ 0.7
SKP1P63208 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.42■□□□□ 0.7
SKP1P63208 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.42■□□□□ 0.7
SKP1P63208 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SKP1P63208 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.42■□□□□ 0.7
SKP1P63208 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.42■□□□□ 0.7
SKP1P63208 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SKP1P63208 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 AC087633.2-202ENST00000565166 1439 ntBASIC19.42■□□□□ 0.7
SKP1P63208 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SKP1P63208 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SKP1P63208 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.41■□□□□ 0.7
SKP1P63208 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SKP1P63208 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.41■□□□□ 0.7
SKP1P63208 TSPY6P-201ENST00000448518 926 ntBASIC19.41■□□□□ 0.7
SKP1P63208 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.41■□□□□ 0.7
SKP1P63208 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SKP1P63208 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.41■□□□□ 0.7
SKP1P63208 CYP2T3P-201ENST00000601990 817 ntBASIC19.41■□□□□ 0.7
SKP1P63208 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SKP1P63208 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SKP1P63208 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SKP1P63208 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SKP1P63208 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SKP1P63208 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SKP1P63208 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.41■□□□□ 0.7
SKP1P63208 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
SKP1P63208 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SKP1P63208 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SKP1P63208 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.4■□□□□ 0.7
SKP1P63208 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SKP1P63208 KRT18P68-201ENST00000392293 1000 ntBASIC19.4■□□□□ 0.7
SKP1P63208 LSM12P1-201ENST00000411836 588 ntBASIC19.4■□□□□ 0.7
SKP1P63208 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.4■□□□□ 0.7
SKP1P63208 MIR4758-201ENST00000577688 71 ntBASIC19.4■□□□□ 0.7
SKP1P63208 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SKP1P63208 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SKP1P63208 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SKP1P63208 AF106564.1-201ENST00000607058 2553 ntBASIC19.39■□□□□ 0.7
SKP1P63208 AC027702.1-201ENST00000563810 1770 ntBASIC19.39■□□□□ 0.7
SKP1P63208 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SKP1P63208 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SKP1P63208 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.39■□□□□ 0.69
SKP1P63208 AC093787.1-201ENST00000450396 207 ntBASIC19.39■□□□□ 0.69
SKP1P63208 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SKP1P63208 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.39■□□□□ 0.69
SKP1P63208 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.39■□□□□ 0.69
SKP1P63208 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
SKP1P63208 AC104771.1-201ENST00000603335 964 ntBASIC19.39■□□□□ 0.69
SKP1P63208 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SKP1P63208 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms