Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKN2DP55273 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.24■□□□□ 0.83
CDKN2DP55273 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.24■□□□□ 0.83
CDKN2DP55273 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.24■□□□□ 0.83
CDKN2DP55273 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
CDKN2DP55273 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKN2DP55273 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDKN2DP55273 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKN2DP55273 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDKN2DP55273 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKN2DP55273 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDKN2DP55273 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN2DP55273 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 AC092720.2-201ENST00000602388 1665 ntBASIC20.23■□□□□ 0.83
CDKN2DP55273 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN2DP55273 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN2DP55273 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.23■□□□□ 0.83
CDKN2DP55273 KRT18P5-201ENST00000436075 1291 ntBASIC20.23■□□□□ 0.83
CDKN2DP55273 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKN2DP55273 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.23■□□□□ 0.83
CDKN2DP55273 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKN2DP55273 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKN2DP55273 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKN2DP55273 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKN2DP55273 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDKN2DP55273 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CDKN2DP55273 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDKN2DP55273 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKN2DP55273 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKN2DP55273 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDKN2DP55273 PCDHAC2-203ENST00000615316 3011 ntBASIC20.22■□□□□ 0.83
CDKN2DP55273 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDKN2DP55273 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKN2DP55273 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKN2DP55273 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKN2DP55273 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDKN2DP55273 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CDKN2DP55273 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 AC112907.3-201ENST00000577781 2400 ntBASIC20.21■□□□□ 0.83
CDKN2DP55273 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDKN2DP55273 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKN2DP55273 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CDKN2DP55273 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKN2DP55273 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDKN2DP55273 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDKN2DP55273 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.21■□□□□ 0.83
CDKN2DP55273 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKN2DP55273 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKN2DP55273 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.2■□□□□ 0.83
CDKN2DP55273 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CDKN2DP55273 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDKN2DP55273 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CDKN2DP55273 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKN2DP55273 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.2■□□□□ 0.82
CDKN2DP55273 AC010536.3-201ENST00000620306 533 ntBASIC20.2■□□□□ 0.82
CDKN2DP55273 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKN2DP55273 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKN2DP55273 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.2■□□□□ 0.82
CDKN2DP55273 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDKN2DP55273 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDKN2DP55273 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKN2DP55273 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKN2DP55273 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
CDKN2DP55273 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDKN2DP55273 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDKN2DP55273 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms