Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP1B3P54709 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP1B3P54709 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP1B3P54709 AC011484.1-201ENST00000377652 1995 ntBASIC17.7■□□□□ 0.42
ATP1B3P54709 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP1B3P54709 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATP1B3P54709 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.7■□□□□ 0.42
ATP1B3P54709 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP1B3P54709 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 AC138907.5-202ENST00000569484 235 ntBASIC17.7■□□□□ 0.42
ATP1B3P54709 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP1B3P54709 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP1B3P54709 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP1B3P54709 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP1B3P54709 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP1B3P54709 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP1B3P54709 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP1B3P54709 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 LINC02228-203ENST00000641970 1355 ntBASIC17.69■□□□□ 0.42
ATP1B3P54709 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP1B3P54709 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP1B3P54709 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP1B3P54709 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP1B3P54709 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP1B3P54709 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP1B3P54709 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP1B3P54709 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP1B3P54709 KRT16P2-201ENST00000414673 1423 ntBASIC17.68■□□□□ 0.42
ATP1B3P54709 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATP1B3P54709 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.68■□□□□ 0.42
ATP1B3P54709 AC245052.3-201ENST00000450182 901 ntBASIC17.68■□□□□ 0.42
ATP1B3P54709 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP1B3P54709 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
ATP1B3P54709 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP1B3P54709 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP1B3P54709 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP1B3P54709 AP005212.1-201ENST00000581547 1997 ntBASIC17.68■□□□□ 0.42
ATP1B3P54709 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP1B3P54709 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ATP1B3P54709 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 AFG3L1P-217ENST00000557444 2447 ntBASIC17.67■□□□□ 0.42
ATP1B3P54709 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ATP1B3P54709 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP1B3P54709 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP1B3P54709 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP1B3P54709 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP1B3P54709 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP1B3P54709 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATP1B3P54709 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP1B3P54709 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 PCDHAC2-203ENST00000615316 3011 ntBASIC17.66■□□□□ 0.42
ATP1B3P54709 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP1B3P54709 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.66■□□□□ 0.42
ATP1B3P54709 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP1B3P54709 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.66■□□□□ 0.42
ATP1B3P54709 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATP1B3P54709 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP1B3P54709 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP1B3P54709 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATP1B3P54709 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms