Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 AC020928.2-201ENST00000588717 2197 ntBASIC22.34■■□□□ 1.17
RANBP2P49792 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RANBP2P49792 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RANBP2P49792 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RANBP2P49792 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RANBP2P49792 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RANBP2P49792 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RANBP2P49792 AC073195.1-201ENST00000607241 877 ntBASIC22.33■■□□□ 1.17
RANBP2P49792 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.33■■□□□ 1.17
RANBP2P49792 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RANBP2P49792 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
RANBP2P49792 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.33■■□□□ 1.17
RANBP2P49792 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.33■■□□□ 1.17
RANBP2P49792 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RANBP2P49792 FAM8A6P-201ENST00000407496 1135 ntBASIC22.33■■□□□ 1.17
RANBP2P49792 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RANBP2P49792 AC026471.6-201ENST00000622954 1905 ntBASIC22.33■■□□□ 1.16
RANBP2P49792 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.33■■□□□ 1.16
RANBP2P49792 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.33■■□□□ 1.16
RANBP2P49792 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RANBP2P49792 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.32■■□□□ 1.16
RANBP2P49792 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RANBP2P49792 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RANBP2P49792 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RANBP2P49792 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RANBP2P49792 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.32■■□□□ 1.16
RANBP2P49792 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RANBP2P49792 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.32■■□□□ 1.16
RANBP2P49792 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.32■■□□□ 1.16
RANBP2P49792 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RANBP2P49792 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.32■■□□□ 1.16
RANBP2P49792 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RANBP2P49792 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.31■■□□□ 1.16
RANBP2P49792 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
RANBP2P49792 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.31■■□□□ 1.16
RANBP2P49792 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RANBP2P49792 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 PVRIG2P-201ENST00000435460 978 ntBASIC22.31■■□□□ 1.16
RANBP2P49792 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.31■■□□□ 1.16
RANBP2P49792 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RANBP2P49792 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.31■■□□□ 1.16
RANBP2P49792 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RANBP2P49792 HTR7P1-201ENST00000538670 1336 ntBASIC22.3■■□□□ 1.16
RANBP2P49792 AC092068.2-201ENST00000590491 1708 ntBASIC22.3■■□□□ 1.16
RANBP2P49792 ANOS2P-203ENST00000472227 1816 ntBASIC22.3■■□□□ 1.16
RANBP2P49792 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RANBP2P49792 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RANBP2P49792 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RANBP2P49792 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.3■■□□□ 1.16
RANBP2P49792 CDV3P1-201ENST00000471403 739 ntBASIC22.3■■□□□ 1.16
RANBP2P49792 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.3■■□□□ 1.16
RANBP2P49792 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.3■■□□□ 1.16
RANBP2P49792 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RANBP2P49792 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RANBP2P49792 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.29■■□□□ 1.16
RANBP2P49792 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RANBP2P49792 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RANBP2P49792 AK4P3-201ENST00000418260 669 ntBASIC22.29■■□□□ 1.16
RANBP2P49792 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RANBP2P49792 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.29■■□□□ 1.16
RANBP2P49792 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RANBP2P49792 HCG4P8-203ENST00000443049 980 ntBASIC22.29■■□□□ 1.16
RANBP2P49792 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.29■■□□□ 1.16
RANBP2P49792 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.29■■□□□ 1.16
RANBP2P49792 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.29■■□□□ 1.16
RANBP2P49792 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RANBP2P49792 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RANBP2P49792 AC010203.1-204ENST00000548782 407 ntBASIC22.29■■□□□ 1.16
RANBP2P49792 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.29■■□□□ 1.16
RANBP2P49792 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.28■■□□□ 1.16
RANBP2P49792 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.28■■□□□ 1.16
RANBP2P49792 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.28■■□□□ 1.16
RANBP2P49792 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.28■■□□□ 1.16
RANBP2P49792 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.28■■□□□ 1.16
RANBP2P49792 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RANBP2P49792 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RANBP2P49792 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RANBP2P49792 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.28■■□□□ 1.16
RANBP2P49792 KRT16P5-201ENST00000455284 522 ntBASIC22.28■■□□□ 1.16
RANBP2P49792 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RANBP2P49792 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.27■■□□□ 1.16
RANBP2P49792 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.27■■□□□ 1.16
RANBP2P49792 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.27■■□□□ 1.16
RANBP2P49792 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.27■■□□□ 1.16
RANBP2P49792 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.27■■□□□ 1.16
RANBP2P49792 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RANBP2P49792 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RANBP2P49792 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms