Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.95■□□□□ 0.46
CX3CR1P49238 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.95■□□□□ 0.46
CX3CR1P49238 KRT18P20-201ENST00000548986 1279 ntBASIC17.95■□□□□ 0.46
CX3CR1P49238 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 AC020907.5-201ENST00000624372 1936 ntBASIC17.95■□□□□ 0.46
CX3CR1P49238 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CX3CR1P49238 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CX3CR1P49238 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.95■□□□□ 0.46
CX3CR1P49238 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CX3CR1P49238 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
CX3CR1P49238 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.94■□□□□ 0.46
CX3CR1P49238 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CX3CR1P49238 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.94■□□□□ 0.46
CX3CR1P49238 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CX3CR1P49238 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.94■□□□□ 0.46
CX3CR1P49238 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.94■□□□□ 0.46
CX3CR1P49238 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.94■□□□□ 0.46
CX3CR1P49238 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CX3CR1P49238 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CX3CR1P49238 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
CX3CR1P49238 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.93■□□□□ 0.46
CX3CR1P49238 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.93■□□□□ 0.46
CX3CR1P49238 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CX3CR1P49238 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CX3CR1P49238 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.93■□□□□ 0.46
CX3CR1P49238 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CX3CR1P49238 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.93■□□□□ 0.46
CX3CR1P49238 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.93■□□□□ 0.46
CX3CR1P49238 AC116050.2-201ENST00000612102 1779 ntBASIC17.93■□□□□ 0.46
CX3CR1P49238 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.93■□□□□ 0.46
CX3CR1P49238 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CX3CR1P49238 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CX3CR1P49238 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CX3CR1P49238 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CR1P49238 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.92■□□□□ 0.46
CX3CR1P49238 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CR1P49238 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.92■□□□□ 0.46
CX3CR1P49238 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CX3CR1P49238 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.92■□□□□ 0.46
CX3CR1P49238 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.92■□□□□ 0.46
CX3CR1P49238 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.92■□□□□ 0.46
CX3CR1P49238 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.92■□□□□ 0.46
CX3CR1P49238 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.92■□□□□ 0.46
CX3CR1P49238 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.92■□□□□ 0.46
CX3CR1P49238 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.92■□□□□ 0.46
CX3CR1P49238 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CX3CR1P49238 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.91■□□□□ 0.46
CX3CR1P49238 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.91■□□□□ 0.46
CX3CR1P49238 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CX3CR1P49238 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.91■□□□□ 0.46
CX3CR1P49238 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.91■□□□□ 0.46
CX3CR1P49238 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CX3CR1P49238 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 KRT19P1-201ENST00000405746 1186 ntBASIC17.91■□□□□ 0.46
CX3CR1P49238 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.91■□□□□ 0.46
CX3CR1P49238 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.91■□□□□ 0.46
CX3CR1P49238 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CX3CR1P49238 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CX3CR1P49238 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CX3CR1P49238 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CX3CR1P49238 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CX3CR1P49238 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms