Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 SWI6YLR182W 2412 nt0.84□□□□□ -2.27
TY1B-JR2P47100 TAH1YCR060W 336 nt0.84□□□□□ -2.27
TY1B-JR2P47100 SPO74YGL170C 1242 nt0.84□□□□□ -2.27
TY1B-JR2P47100 CTK1YKL139W 1587 nt0.84□□□□□ -2.28
TY1B-JR2P47100 FCF2YLR051C 654 nt0.83□□□□□ -2.28
TY1B-JR2P47100 NUP145YGL092W 3954 nt0.83□□□□□ -2.28
TY1B-JR2P47100 RPL31AYDL075W 342 nt0.83□□□□□ -2.28
TY1B-JR2P47100 MSS2YDL107W 1056 nt0.83□□□□□ -2.28
TY1B-JR2P47100 RSA3YLR221C 663 nt0.83□□□□□ -2.28
TY1B-JR2P47100 MFB1YDR219C 1398 nt0.83□□□□□ -2.28
TY1B-JR2P47100 UBP11YKR098C 2154 nt0.83□□□□□ -2.28
TY1B-JR2P47100 APC2YLR127C 2562 nt0.82□□□□□ -2.28
TY1B-JR2P47100 RTG3YBL103C 1461 nt0.82□□□□□ -2.28
TY1B-JR2P47100 ESC2YDR363W 1371 nt0.82□□□□□ -2.28
TY1B-JR2P47100 AVT5YBL089W 1380 nt0.82□□□□□ -2.28
TY1B-JR2P47100 RRP6YOR001W 2202 nt0.82□□□□□ -2.28
TY1B-JR2P47100 MED8YBR193C 672 nt0.82□□□□□ -2.28
TY1B-JR2P47100 SEC1YDR164C 2175 nt0.81□□□□□ -2.28
TY1B-JR2P47100 CRD1YDL142C 852 nt0.81□□□□□ -2.28
TY1B-JR2P47100 ERV14YGL054C 417 nt0.81□□□□□ -2.28
TY1B-JR2P47100 YKL177WYKL177W 339 nt0.81□□□□□ -2.28
TY1B-JR2P47100 PRK1YIL095W 2433 nt0.81□□□□□ -2.28
TY1B-JR2P47100 PUF4YGL014W 2667 nt0.81□□□□□ -2.28
TY1B-JR2P47100 snR76snR76 109 nt0.8□□□□□ -2.28
TY1B-JR2P47100 FMN1YDR236C 657 nt0.8□□□□□ -2.28
TY1B-JR2P47100 GLC7YER133W 939 nt0.8□□□□□ -2.28
TY1B-JR2P47100 CPR3YML078W 549 nt0.8□□□□□ -2.28
TY1B-JR2P47100 YRO2YBR054W 1035 nt0.8□□□□□ -2.28
TY1B-JR2P47100 YGR273CYGR273C 525 nt0.8□□□□□ -2.28
TY1B-JR2P47100 SNC1YAL030W 354 nt0.8□□□□□ -2.28
TY1B-JR2P47100 YLR379WYLR379W 375 nt0.8□□□□□ -2.28
TY1B-JR2P47100 ATG5YPL149W 885 nt0.8□□□□□ -2.28
TY1B-JR2P47100 YMR31YFR049W 372 nt0.79□□□□□ -2.28
TY1B-JR2P47100 RPS18BYML026C 441 nt0.79□□□□□ -2.28
TY1B-JR2P47100 VTI1YMR197C 654 nt0.79□□□□□ -2.28
TY1B-JR2P47100 DYN3YMR299C 939 nt0.79□□□□□ -2.28
TY1B-JR2P47100 YNL144W-AYNL144W-A 84 nt0.79□□□□□ -2.28
TY1B-JR2P47100 BAG7YOR134W 1230 nt0.79□□□□□ -2.28
TY1B-JR2P47100 PEX27YOR193W 1131 nt0.79□□□□□ -2.28
TY1B-JR2P47100 PRM4YPL156C 855 nt0.79□□□□□ -2.28
TY1B-JR2P47100 FUS1YCL027W 1539 nt0.79□□□□□ -2.28
TY1B-JR2P47100 POL4YCR014C 1749 nt0.79□□□□□ -2.28
TY1B-JR2P47100 YMR052C-AYMR052C-A 366 nt0.78□□□□□ -2.28
TY1B-JR2P47100 YPL238CYPL238C 390 nt0.78□□□□□ -2.28
TY1B-JR2P47100 YDR132CYDR132C 1488 nt0.78□□□□□ -2.28
TY1B-JR2P47100 AEP3YPL005W 1821 nt0.78□□□□□ -2.28
TY1B-JR2P47100 RPL37BYDR500C 267 nt0.78□□□□□ -2.29
TY1B-JR2P47100 VOA1YGR106C 798 nt0.78□□□□□ -2.29
TY1B-JR2P47100 YMR031W-AYMR031W-A 327 nt0.78□□□□□ -2.29
TY1B-JR2P47100 BTT1YDR252W 450 nt0.77□□□□□ -2.29
TY1B-JR2P47100 CTK3YML112W 891 nt0.77□□□□□ -2.29
TY1B-JR2P47100 BST1YFL025C 3090 nt0.77□□□□□ -2.29
TY1B-JR2P47100 SHS1YDL225W 1656 nt0.77□□□□□ -2.29
TY1B-JR2P47100 NBL1YHR199C-A 222 nt0.76□□□□□ -2.29
TY1B-JR2P47100 CKA1YIL035C 1119 nt0.76□□□□□ -2.29
TY1B-JR2P47100 MSS4YDR208W 2340 nt0.76□□□□□ -2.29
TY1B-JR2P47100 EST2YLR318W 2655 nt0.76□□□□□ -2.29
TY1B-JR2P47100 RNH202YDR279W 1053 nt0.75□□□□□ -2.29
TY1B-JR2P47100 YLR400WYLR400W 474 nt0.75□□□□□ -2.29
TY1B-JR2P47100 PIN3YPR154W 648 nt0.75□□□□□ -2.29
TY1B-JR2P47100 YNR066CYNR066C 1311 nt0.75□□□□□ -2.29
TY1B-JR2P47100 PBP4YDL053C 558 nt0.75□□□□□ -2.29
TY1B-JR2P47100 UBC9YDL064W 474 nt0.75□□□□□ -2.29
TY1B-JR2P47100 YER078W-AYER078W-A 165 nt0.75□□□□□ -2.29
TY1B-JR2P47100 RGI2YIL057C 495 nt0.75□□□□□ -2.29
TY1B-JR2P47100 UBC5YDR059C 447 nt0.74□□□□□ -2.29
TY1B-JR2P47100 YER107W-AYER107W-A 321 nt0.74□□□□□ -2.29
TY1B-JR2P47100 HHT2YNL031C 411 nt0.74□□□□□ -2.29
TY1B-JR2P47100 PUS9YDL036C 1389 nt0.74□□□□□ -2.29
TY1B-JR2P47100 ATP16YDL004W 483 nt0.73□□□□□ -2.29
TY1B-JR2P47100 ACB1YGR037C 264 nt0.73□□□□□ -2.29
TY1B-JR2P47100 MRPL25YGR076C 474 nt0.73□□□□□ -2.29
TY1B-JR2P47100 YGR190CYGR190C 366 nt0.73□□□□□ -2.29
TY1B-JR2P47100 SPC42YKL042W 1092 nt0.73□□□□□ -2.29
TY1B-JR2P47100 SRN2YLR119W 642 nt0.73□□□□□ -2.29
TY1B-JR2P47100 MPD1YOR288C 957 nt0.73□□□□□ -2.29
TY1B-JR2P47100 BEM3YPL115C 3387 nt0.72□□□□□ -2.29
TY1B-JR2P47100 HSE1YHL002W 1359 nt0.72□□□□□ -2.29
TY1B-JR2P47100 ESA1YOR244W 1338 nt0.72□□□□□ -2.29
TY1B-JR2P47100 MNE1YOR350C 1992 nt0.72□□□□□ -2.29
TY1B-JR2P47100 YOR203WYOR203W 354 nt0.72□□□□□ -2.29
TY1B-JR2P47100 CLG1YGL215W 1359 nt0.71□□□□□ -2.3
TY1B-JR2P47100 ALY2YJL084C 3141 nt0.71□□□□□ -2.3
TY1B-JR2P47100 PAF1YBR279W 1338 nt0.71□□□□□ -2.3
TY1B-JR2P47100 SHR3YDL212W 633 nt0.71□□□□□ -2.3
TY1B-JR2P47100 RMD5YDR255C 1266 nt0.71□□□□□ -2.3
TY1B-JR2P47100 YDR320W-BYDR320W-B 138 nt0.71□□□□□ -2.3
TY1B-JR2P47100 LRS4YDR439W 1044 nt0.71□□□□□ -2.3
TY1B-JR2P47100 YLR444CYLR444C 303 nt0.71□□□□□ -2.3
TY1B-JR2P47100 KAP122YGL016W 3246 nt0.71□□□□□ -2.3
TY1B-JR2P47100 HLR1YDR528W 1272 nt0.7□□□□□ -2.3
TY1B-JR2P47100 CTL1YMR180C 963 nt0.7□□□□□ -2.3
TY1B-JR2P47100 YGR064WYGR064W 369 nt0.7□□□□□ -2.3
TY1B-JR2P47100 SRL1YOR247W 633 nt0.7□□□□□ -2.3
TY1B-JR2P47100 ACA1YER045C 1470 nt0.7□□□□□ -2.3
TY1B-JR2P47100 YLR149CYLR149C 2193 nt0.69□□□□□ -2.3
TY1B-JR2P47100 HMI1YOL095C 2121 nt0.69□□□□□ -2.3
TY1B-JR2P47100 CRM1YGR218W 3255 nt0.69□□□□□ -2.3
TY1B-JR2P47100 SLF1YDR515W 1344 nt0.68□□□□□ -2.3
TY1B-JR2P47100 CDC50YCR094W 1176 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 36.6 ms