Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.19■□□□□ 0.34
LMO1P25800 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMO1P25800 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.19■□□□□ 0.34
LMO1P25800 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LMO1P25800 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.19■□□□□ 0.34
LMO1P25800 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.19■□□□□ 0.34
LMO1P25800 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.19■□□□□ 0.34
LMO1P25800 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.19■□□□□ 0.34
LMO1P25800 UBE2DNL-204ENST00000602536 740 ntBASIC17.19■□□□□ 0.34
LMO1P25800 AC087623.3-201ENST00000607047 1098 ntBASIC17.19■□□□□ 0.34
LMO1P25800 MYCNOS-205ENST00000641950 531 ntBASIC17.19■□□□□ 0.34
LMO1P25800 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LMO1P25800 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.19■□□□□ 0.34
LMO1P25800 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LMO1P25800 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.19■□□□□ 0.34
LMO1P25800 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LMO1P25800 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.19■□□□□ 0.34
LMO1P25800 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LMO1P25800 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 AC020907.5-201ENST00000624372 1936 ntBASIC17.18■□□□□ 0.34
LMO1P25800 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
LMO1P25800 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LMO1P25800 AC026271.2-201ENST00000428091 497 ntBASIC17.18■□□□□ 0.34
LMO1P25800 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.18■□□□□ 0.34
LMO1P25800 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LMO1P25800 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LMO1P25800 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.18■□□□□ 0.34
LMO1P25800 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LMO1P25800 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LMO1P25800 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.17■□□□□ 0.34
LMO1P25800 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.17■□□□□ 0.34
LMO1P25800 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 AC007322.3-201ENST00000426526 701 ntBASIC17.17■□□□□ 0.34
LMO1P25800 KRT18P11-201ENST00000435214 1283 ntBASIC17.17■□□□□ 0.34
LMO1P25800 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.17■□□□□ 0.34
LMO1P25800 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
LMO1P25800 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LMO1P25800 MIR2861-201ENST00000636310 90 ntBASIC17.17■□□□□ 0.34
LMO1P25800 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LMO1P25800 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
LMO1P25800 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO1P25800 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LMO1P25800 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LMO1P25800 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LMO1P25800 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.16■□□□□ 0.34
LMO1P25800 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.16■□□□□ 0.34
LMO1P25800 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.16■□□□□ 0.34
LMO1P25800 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.16■□□□□ 0.34
LMO1P25800 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO1P25800 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.16■□□□□ 0.34
LMO1P25800 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO1P25800 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO1P25800 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO1P25800 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms