Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YJL156W-AYJL156W-A 222 nt1.06□□□□□ -2.24
CDC39P25655 PKR1YMR123W 369 nt1.06□□□□□ -2.24
CDC39P25655 RRT16YNL105W 429 nt1.06□□□□□ -2.24
CDC39P25655 YBR051WYBR051W 351 nt1.06□□□□□ -2.24
CDC39P25655 UBP16YPL072W 1500 nt1.06□□□□□ -2.24
CDC39P25655 COX13YGL191W 390 nt1.06□□□□□ -2.24
CDC39P25655 SLX9YGR081C 633 nt1.06□□□□□ -2.24
CDC39P25655 YLR042CYLR042C 486 nt1.06□□□□□ -2.24
CDC39P25655 YNL235CYNL235C 432 nt1.06□□□□□ -2.24
CDC39P25655 GRE2YOL151W 1029 nt1.06□□□□□ -2.24
CDC39P25655 TRZ1YKR079C 2517 nt1.05□□□□□ -2.24
CDC39P25655 CRD1YDL142C 852 nt1.05□□□□□ -2.24
CDC39P25655 FMP16YDR070C 282 nt1.05□□□□□ -2.24
CDC39P25655 TPM2YIL138C 486 nt1.05□□□□□ -2.24
CDC39P25655 YBL073WYBL073W 312 nt1.05□□□□□ -2.24
CDC39P25655 YOL118CYOL118C 309 nt1.05□□□□□ -2.24
CDC39P25655 YOR020W-AYOR020W-A 273 nt1.05□□□□□ -2.24
CDC39P25655 SAR1YPL218W 573 nt1.05□□□□□ -2.24
CDC39P25655 PBY1YBR094W 2262 nt1.05□□□□□ -2.24
CDC39P25655 YEA4YEL004W 1029 nt1.04□□□□□ -2.24
CDC39P25655 LSM4YER112W 564 nt1.04□□□□□ -2.24
CDC39P25655 GTR2YGR163W 1026 nt1.04□□□□□ -2.24
CDC39P25655 TRM732YMR259C 4263 nt1.04□□□□□ -2.24
CDC39P25655 YER046W-AYER046W-A 330 nt1.04□□□□□ -2.24
CDC39P25655 COG7YGL005C 840 nt1.04□□□□□ -2.24
CDC39P25655 YLR224WYLR224W 1110 nt1.04□□□□□ -2.24
CDC39P25655 YNR021WYNR021W 1215 nt1.04□□□□□ -2.24
CDC39P25655 YNR068CYNR068C 819 nt1.04□□□□□ -2.24
CDC39P25655 SRL4YPL033C 846 nt1.04□□□□□ -2.24
CDC39P25655 ERV15YBR210W 429 nt1.04□□□□□ -2.24
CDC39P25655 IRR1YIL026C 3453 nt1.04□□□□□ -2.24
CDC39P25655 COG4YPR105C 2586 nt1.04□□□□□ -2.24
CDC39P25655 SYH1YPL105C 2550 nt1.03□□□□□ -2.24
CDC39P25655 MDM32YOR147W 1869 nt1.03□□□□□ -2.24
CDC39P25655 NSE4YDL105W 1209 nt1.03□□□□□ -2.24
CDC39P25655 YEL010WYEL010W 351 nt1.03□□□□□ -2.24
CDC39P25655 YGL242CYGL242C 546 nt1.03□□□□□ -2.24
CDC39P25655 HOT13YKL084W 351 nt1.03□□□□□ -2.24
CDC39P25655 YIP3YNL044W 531 nt1.03□□□□□ -2.24
CDC39P25655 SNF5YBR289W 2718 nt1.03□□□□□ -2.24
CDC39P25655 YDR286CYDR286C 345 nt1.03□□□□□ -2.25
CDC39P25655 RPL37BYDR500C 267 nt1.03□□□□□ -2.25
CDC39P25655 POP6YGR030C 477 nt1.03□□□□□ -2.25
CDC39P25655 TMA7YLR262C-A 195 nt1.03□□□□□ -2.25
CDC39P25655 YOR029WYOR029W 336 nt1.03□□□□□ -2.25
CDC39P25655 YBR090CYBR090C 369 nt1.03□□□□□ -2.25
CDC39P25655 YOR019WYOR019W 2193 nt1.02□□□□□ -2.25
CDC39P25655 HKR1YDR420W 5409 nt1.02□□□□□ -2.25
CDC39P25655 SRD1YCR018C 666 nt1.02□□□□□ -2.25
CDC39P25655 PRP38YGR075C 729 nt1.02□□□□□ -2.25
CDC39P25655 FYV4YHR059W 393 nt1.02□□□□□ -2.25
CDC39P25655 SNF12YNR023W 1701 nt1.02□□□□□ -2.25
CDC39P25655 YCK3YER123W 1575 nt1.02□□□□□ -2.25
CDC39P25655 MAL33YBR297W 1407 nt1.01□□□□□ -2.25
CDC39P25655 AHC2YCR082W 387 nt1.01□□□□□ -2.25
CDC39P25655 TPK3YKL166C 1197 nt1.01□□□□□ -2.25
CDC39P25655 YBL029C-AYBL029C-A 285 nt1.01□□□□□ -2.25
CDC39P25655 SHS1YDL225W 1656 nt1.01□□□□□ -2.25
CDC39P25655 YOR343W-BYOR343W-B 5313 nt1.01□□□□□ -2.25
CDC39P25655 RPL31AYDL075W 342 nt1.01□□□□□ -2.25
CDC39P25655 SMD1YGR074W 441 nt1.01□□□□□ -2.25
CDC39P25655 APA1YCL050C 966 nt1.01□□□□□ -2.25
CDC39P25655 VPS54YDR027C 2670 nt1.01□□□□□ -2.25
CDC39P25655 RAD18YCR066W 1464 nt1.01□□□□□ -2.25
CDC39P25655 SPE1YKL184W 1401 nt1□□□□□ -2.25
CDC39P25655 SPO75YLL005C 2607 nt1□□□□□ -2.25
CDC39P25655 MYO2YOR326W 4725 nt1□□□□□ -2.25
CDC39P25655 VAB2YEL005C 849 nt1□□□□□ -2.25
CDC39P25655 YMR175W-AYMR175W-A 195 nt1□□□□□ -2.25
CDC39P25655 RPL33BYOR234C 324 nt1□□□□□ -2.25
CDC39P25655 YPR014CYPR014C 330 nt1□□□□□ -2.25
CDC39P25655 SEC63YOR254C 1992 nt1□□□□□ -2.25
CDC39P25655 MEC1YBR136W 7107 nt1□□□□□ -2.25
CDC39P25655 ATP16YDL004W 483 nt1□□□□□ -2.25
CDC39P25655 YDR262WYDR262W 819 nt1□□□□□ -2.25
CDC39P25655 RPF2YKR081C 1035 nt1□□□□□ -2.25
CDC39P25655 YLR031WYLR031W 561 nt1□□□□□ -2.25
CDC39P25655 YBR013CYBR013C 390 nt1□□□□□ -2.25
CDC39P25655 NOP53YPL146C 1368 nt1□□□□□ -2.25
CDC39P25655 OST1YJL002C 1431 nt0.99□□□□□ -2.25
CDC39P25655 YMR045CYMR045C 5268 nt0.99□□□□□ -2.25
CDC39P25655 RVS161YCR009C 798 nt0.99□□□□□ -2.25
CDC39P25655 YDR461C-AYDR461C-A 243 nt0.99□□□□□ -2.25
CDC39P25655 GOS1YHL031C 672 nt0.99□□□□□ -2.25
CDC39P25655 PAM16YJL104W 450 nt0.99□□□□□ -2.25
CDC39P25655 YJL127C-BYJL127C-B 159 nt0.99□□□□□ -2.25
CDC39P25655 GIM3YNL153C 390 nt0.99□□□□□ -2.25
CDC39P25655 IZH4YOL101C 939 nt0.99□□□□□ -2.25
CDC39P25655 SFM1YOR021C 642 nt0.99□□□□□ -2.25
CDC39P25655 SUI2YJR007W 915 nt0.98□□□□□ -2.25
CDC39P25655 BI3Q0115 1554 nt0.98□□□□□ -2.25
CDC39P25655 ATX2YOR079C 942 nt0.98□□□□□ -2.25
CDC39P25655 SPC29YPL124W 762 nt0.98□□□□□ -2.25
CDC39P25655 YSY6YBR162W-A 198 nt0.98□□□□□ -2.25
CDC39P25655 SKI3YPR189W 4299 nt0.98□□□□□ -2.25
CDC39P25655 RPH1YER169W 2391 nt0.97□□□□□ -2.25
CDC39P25655 YDR169C-AYDR169C-A 150 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)BtF(GAA)B 73 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)FtF(GAA)F 73 nt0.97□□□□□ -2.25
CDC39P25655 tF(GAA)GtF(GAA)G 73 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 178.1 ms