Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.59■□□□□ 0.89
CTPS1P17812 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS1P17812 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS1P17812 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 AC027702.1-201ENST00000563810 1770 ntBASIC20.59■□□□□ 0.89
CTPS1P17812 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CTPS1P17812 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS1P17812 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS1P17812 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS1P17812 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS1P17812 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS1P17812 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS1P17812 BX276092.2-201ENST00000417668 665 ntBASIC20.58■□□□□ 0.89
CTPS1P17812 AL138781.1-201ENST00000566567 1274 ntBASIC20.58■□□□□ 0.89
CTPS1P17812 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CTPS1P17812 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTPS1P17812 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.58■□□□□ 0.89
CTPS1P17812 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTPS1P17812 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.58■□□□□ 0.89
CTPS1P17812 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS1P17812 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS1P17812 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS1P17812 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CTPS1P17812 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CTPS1P17812 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.58■□□□□ 0.88
CTPS1P17812 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTPS1P17812 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.57■□□□□ 0.88
CTPS1P17812 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.57■□□□□ 0.88
CTPS1P17812 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.57■□□□□ 0.88
CTPS1P17812 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.57■□□□□ 0.88
CTPS1P17812 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.57■□□□□ 0.88
CTPS1P17812 MCRIP2P1-201ENST00000394346 511 ntBASIC20.57■□□□□ 0.88
CTPS1P17812 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 AL355802.2-201ENST00000402069 882 ntBASIC20.57■□□□□ 0.88
CTPS1P17812 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.57■□□□□ 0.88
CTPS1P17812 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.57■□□□□ 0.88
CTPS1P17812 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.57■□□□□ 0.88
CTPS1P17812 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTPS1P17812 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CTPS1P17812 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CTPS1P17812 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.56■□□□□ 0.88
CTPS1P17812 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.56■□□□□ 0.88
CTPS1P17812 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CTPS1P17812 MIPEPP3-201ENST00000412105 444 ntBASIC20.56■□□□□ 0.88
CTPS1P17812 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 CYP2T3P-201ENST00000601990 817 ntBASIC20.56■□□□□ 0.88
CTPS1P17812 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 KRT17P1-201ENST00000399211 1546 ntBASIC20.56■□□□□ 0.88
CTPS1P17812 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.56■□□□□ 0.88
CTPS1P17812 FP700111.2-201ENST00000619190 1892 ntBASIC20.56■□□□□ 0.88
CTPS1P17812 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTPS1P17812 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTPS1P17812 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTPS1P17812 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.55■□□□□ 0.88
CTPS1P17812 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.55■□□□□ 0.88
CTPS1P17812 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CTPS1P17812 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.55■□□□□ 0.88
CTPS1P17812 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.55■□□□□ 0.88
CTPS1P17812 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.55■□□□□ 0.88
CTPS1P17812 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.55■□□□□ 0.88
CTPS1P17812 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.55■□□□□ 0.88
CTPS1P17812 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CTPS1P17812 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.55■□□□□ 0.88
CTPS1P17812 AC100791.3-201ENST00000617619 330 ntBASIC20.55■□□□□ 0.88
CTPS1P17812 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.55■□□□□ 0.88
CTPS1P17812 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.55■□□□□ 0.88
CTPS1P17812 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.55■□□□□ 0.88
CTPS1P17812 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTPS1P17812 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
CTPS1P17812 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTPS1P17812 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
CTPS1P17812 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.54■□□□□ 0.88
CTPS1P17812 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTPS1P17812 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTPS1P17812 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms