Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.99■□□□□ 0.95
BRAFP15056 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.99■□□□□ 0.95
BRAFP15056 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAFP15056 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.99■□□□□ 0.95
BRAFP15056 AC022517.1-201ENST00000592429 346 ntBASIC20.99■□□□□ 0.95
BRAFP15056 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAFP15056 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.99■□□□□ 0.95
BRAFP15056 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.99■□□□□ 0.95
BRAFP15056 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.99■□□□□ 0.95
BRAFP15056 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
BRAFP15056 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAFP15056 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.98■□□□□ 0.95
BRAFP15056 AC055733.4-201ENST00000638462 1354 ntBASIC20.98■□□□□ 0.95
BRAFP15056 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
BRAFP15056 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
BRAFP15056 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRAFP15056 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.98■□□□□ 0.95
BRAFP15056 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.98■□□□□ 0.95
BRAFP15056 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
BRAFP15056 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.98■□□□□ 0.95
BRAFP15056 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.98■□□□□ 0.95
BRAFP15056 AC007225.1-201ENST00000566331 1836 ntBASIC20.98■□□□□ 0.95
BRAFP15056 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
BRAFP15056 AC112907.3-201ENST00000577781 2400 ntBASIC20.98■□□□□ 0.95
BRAFP15056 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRAFP15056 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BRAFP15056 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BRAFP15056 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BRAFP15056 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 AP004607.4-201ENST00000530158 1459 ntBASIC20.97■□□□□ 0.95
BRAFP15056 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.97■□□□□ 0.95
BRAFP15056 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.97■□□□□ 0.95
BRAFP15056 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.97■□□□□ 0.95
BRAFP15056 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRAFP15056 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.96■□□□□ 0.95
BRAFP15056 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.96■□□□□ 0.95
BRAFP15056 AC004854.2-201ENST00000608450 1441 ntBASIC20.96■□□□□ 0.95
BRAFP15056 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.96■□□□□ 0.95
BRAFP15056 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
BRAFP15056 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BRAFP15056 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRAFP15056 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
BRAFP15056 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.95■□□□□ 0.94
BRAFP15056 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 AP006587.3-201ENST00000525742 1516 ntBASIC20.95■□□□□ 0.94
BRAFP15056 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.95■□□□□ 0.94
BRAFP15056 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.95■□□□□ 0.94
BRAFP15056 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.95■□□□□ 0.94
BRAFP15056 AC079140.4-201ENST00000507448 529 ntBASIC20.95■□□□□ 0.94
BRAFP15056 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.95■□□□□ 0.94
BRAFP15056 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.95■□□□□ 0.94
BRAFP15056 IKBKGP1-201ENST00000612193 1073 ntBASIC20.95■□□□□ 0.94
BRAFP15056 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRAFP15056 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.95■□□□□ 0.94
BRAFP15056 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.95■□□□□ 0.94
BRAFP15056 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.95■□□□□ 0.94
BRAFP15056 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
BRAFP15056 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.94■□□□□ 0.94
BRAFP15056 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.94■□□□□ 0.94
BRAFP15056 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.94■□□□□ 0.94
BRAFP15056 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
BRAFP15056 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.94■□□□□ 0.94
BRAFP15056 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.94■□□□□ 0.94
BRAFP15056 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.94■□□□□ 0.94
BRAFP15056 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.94■□□□□ 0.94
BRAFP15056 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRAFP15056 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms