Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.7■□□□□ 0.74
COX4I1P13073 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COX4I1P13073 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.7■□□□□ 0.74
COX4I1P13073 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.7■□□□□ 0.74
COX4I1P13073 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 DUX4L19-201ENST00000557448 1267 ntBASIC19.7■□□□□ 0.74
COX4I1P13073 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.7■□□□□ 0.74
COX4I1P13073 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.7■□□□□ 0.74
COX4I1P13073 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 AP000974.1-201ENST00000623909 2387 ntBASIC19.7■□□□□ 0.74
COX4I1P13073 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COX4I1P13073 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
COX4I1P13073 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COX4I1P13073 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.69■□□□□ 0.74
COX4I1P13073 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.69■□□□□ 0.74
COX4I1P13073 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.69■□□□□ 0.74
COX4I1P13073 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.69■□□□□ 0.74
COX4I1P13073 AC133561.4-201ENST00000566112 224 ntBASIC19.69■□□□□ 0.74
COX4I1P13073 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.69■□□□□ 0.74
COX4I1P13073 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.69■□□□□ 0.74
COX4I1P13073 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX4I1P13073 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COX4I1P13073 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.69■□□□□ 0.74
COX4I1P13073 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.69■□□□□ 0.74
COX4I1P13073 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.68■□□□□ 0.74
COX4I1P13073 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.68■□□□□ 0.74
COX4I1P13073 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.68■□□□□ 0.74
COX4I1P13073 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COX4I1P13073 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COX4I1P13073 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COX4I1P13073 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COX4I1P13073 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COX4I1P13073 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COX4I1P13073 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COX4I1P13073 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COX4I1P13073 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
COX4I1P13073 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.67■□□□□ 0.74
COX4I1P13073 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COX4I1P13073 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.67■□□□□ 0.74
COX4I1P13073 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COX4I1P13073 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.66■□□□□ 0.74
COX4I1P13073 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.66■□□□□ 0.74
COX4I1P13073 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
COX4I1P13073 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 AP004607.4-201ENST00000530158 1459 ntBASIC19.66■□□□□ 0.74
COX4I1P13073 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COX4I1P13073 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COX4I1P13073 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COX4I1P13073 TNXA-203ENST00000507684 2038 ntBASIC19.65■□□□□ 0.74
COX4I1P13073 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COX4I1P13073 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms