Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.28■■□□□ 1.32
HOXC6P09630 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HOXC6P09630 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
HOXC6P09630 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.27■■□□□ 1.32
HOXC6P09630 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 AC242852.2-201ENST00000615738 1807 ntBASIC23.27■■□□□ 1.32
HOXC6P09630 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
HOXC6P09630 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
HOXC6P09630 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
HOXC6P09630 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.27■■□□□ 1.32
HOXC6P09630 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.27■■□□□ 1.32
HOXC6P09630 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 RARRES2P10-201ENST00000564312 460 ntBASIC23.27■■□□□ 1.32
HOXC6P09630 MIR4785-201ENST00000585005 73 ntBASIC23.27■■□□□ 1.32
HOXC6P09630 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
HOXC6P09630 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 AC010331.1-201ENST00000611423 582 ntBASIC23.27■■□□□ 1.32
HOXC6P09630 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.27■■□□□ 1.32
HOXC6P09630 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
HOXC6P09630 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HOXC6P09630 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.26■■□□□ 1.31
HOXC6P09630 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
HOXC6P09630 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.26■■□□□ 1.31
HOXC6P09630 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.26■■□□□ 1.31
HOXC6P09630 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.26■■□□□ 1.31
HOXC6P09630 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.26■■□□□ 1.31
HOXC6P09630 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 AC113410.3-201ENST00000623366 203 ntBASIC23.26■■□□□ 1.31
HOXC6P09630 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.26■■□□□ 1.31
HOXC6P09630 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
HOXC6P09630 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HOXC6P09630 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HOXC6P09630 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HOXC6P09630 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.25■■□□□ 1.31
HOXC6P09630 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.25■■□□□ 1.31
HOXC6P09630 KRASP1-201ENST00000407852 552 ntBASIC23.25■■□□□ 1.31
HOXC6P09630 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.25■■□□□ 1.31
HOXC6P09630 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.25■■□□□ 1.31
HOXC6P09630 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.25■■□□□ 1.31
HOXC6P09630 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
HOXC6P09630 AC006557.6-201ENST00000623071 864 ntBASIC23.25■■□□□ 1.31
HOXC6P09630 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HOXC6P09630 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.24■■□□□ 1.31
HOXC6P09630 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HOXC6P09630 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HOXC6P09630 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HOXC6P09630 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.24■■□□□ 1.31
HOXC6P09630 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HOXC6P09630 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.24■■□□□ 1.31
HOXC6P09630 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.24■■□□□ 1.31
HOXC6P09630 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.24■■□□□ 1.31
HOXC6P09630 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.24■■□□□ 1.31
HOXC6P09630 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HOXC6P09630 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.24■■□□□ 1.31
HOXC6P09630 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HOXC6P09630 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HOXC6P09630 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
HOXC6P09630 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.23■■□□□ 1.31
HOXC6P09630 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.23■■□□□ 1.31
HOXC6P09630 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.23■■□□□ 1.31
HOXC6P09630 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.23■■□□□ 1.31
HOXC6P09630 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.23■■□□□ 1.31
HOXC6P09630 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.23■■□□□ 1.31
HOXC6P09630 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.23■■□□□ 1.31
HOXC6P09630 AC012306.2-201ENST00000609350 630 ntBASIC23.23■■□□□ 1.31
HOXC6P09630 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
HOXC6P09630 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.23■■□□□ 1.31
HOXC6P09630 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
HOXC6P09630 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
HOXC6P09630 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.23■■□□□ 1.31
HOXC6P09630 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HOXC6P09630 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms