Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 KRT18P20-201ENST00000548986 1279 ntBASIC18.09■□□□□ 0.49
ERCC1P07992 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC1P07992 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.09■□□□□ 0.49
ERCC1P07992 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 AC073111.5-205ENST00000641717 521 ntBASIC18.09■□□□□ 0.49
ERCC1P07992 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ERCC1P07992 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC1P07992 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC1P07992 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
ERCC1P07992 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC1P07992 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ERCC1P07992 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.08■□□□□ 0.49
ERCC1P07992 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC1P07992 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC1P07992 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC1P07992 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC1P07992 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC1P07992 ID1-201ENST00000376105 1233 ntBASIC18.08■□□□□ 0.48
ERCC1P07992 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC1P07992 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
ERCC1P07992 AC138907.5-202ENST00000569484 235 ntBASIC18.08■□□□□ 0.48
ERCC1P07992 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ERCC1P07992 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC1P07992 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC1P07992 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.08■□□□□ 0.48
ERCC1P07992 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC1P07992 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC1P07992 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ERCC1P07992 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC1P07992 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC1P07992 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ERCC1P07992 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC1P07992 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC1P07992 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ERCC1P07992 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC1P07992 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 GABARAPL3-202ENST00000624044 1851 ntBASIC18.06■□□□□ 0.48
ERCC1P07992 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC1P07992 AC010141.2-201ENST00000452426 721 ntBASIC18.06■□□□□ 0.48
ERCC1P07992 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC1P07992 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.06■□□□□ 0.48
ERCC1P07992 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ERCC1P07992 AC008175.2-201ENST00000612840 297 ntBASIC18.06■□□□□ 0.48
ERCC1P07992 AC231657.2-201ENST00000624556 255 ntBASIC18.06■□□□□ 0.48
ERCC1P07992 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC1P07992 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC1P07992 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.06■□□□□ 0.48
ERCC1P07992 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC1P07992 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ERCC1P07992 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.05■□□□□ 0.48
ERCC1P07992 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ERCC1P07992 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.05■□□□□ 0.48
ERCC1P07992 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms