Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGN1P05114 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGN1P05114 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGN1P05114 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGN1P05114 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.51■□□□□ 0.55
HMGN1P05114 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGN1P05114 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGN1P05114 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGN1P05114 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.51■□□□□ 0.55
HMGN1P05114 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HMGN1P05114 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGN1P05114 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGN1P05114 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGN1P05114 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HMGN1P05114 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGN1P05114 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGN1P05114 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.5■□□□□ 0.55
HMGN1P05114 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
HMGN1P05114 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
HMGN1P05114 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGN1P05114 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGN1P05114 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HMGN1P05114 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGN1P05114 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGN1P05114 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HMGN1P05114 AC112907.3-201ENST00000577781 2400 ntBASIC18.49■□□□□ 0.55
HMGN1P05114 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 EDA-201ENST00000338901 1233 ntBASIC18.49■□□□□ 0.55
HMGN1P05114 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 PBX2P1-201ENST00000493219 1291 ntBASIC18.49■□□□□ 0.55
HMGN1P05114 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGN1P05114 RASA4CP-201ENST00000424092 1398 ntBASIC18.49■□□□□ 0.55
HMGN1P05114 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
HMGN1P05114 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGN1P05114 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGN1P05114 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGN1P05114 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMGN1P05114 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMGN1P05114 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.48■□□□□ 0.55
HMGN1P05114 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.48■□□□□ 0.55
HMGN1P05114 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGN1P05114 AC012414.1-201ENST00000556676 535 ntBASIC18.48■□□□□ 0.55
HMGN1P05114 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGN1P05114 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGN1P05114 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HMGN1P05114 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.47■□□□□ 0.55
HMGN1P05114 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGN1P05114 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGN1P05114 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGN1P05114 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGN1P05114 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HMGN1P05114 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGN1P05114 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGN1P05114 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGN1P05114 AC245052.3-201ENST00000450182 901 ntBASIC18.46■□□□□ 0.55
HMGN1P05114 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGN1P05114 AP001330.3-201ENST00000520123 633 ntBASIC18.46■□□□□ 0.55
HMGN1P05114 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGN1P05114 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.46■□□□□ 0.55
HMGN1P05114 AC106739.1-201ENST00000617035 715 ntBASIC18.46■□□□□ 0.55
HMGN1P05114 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGN1P05114 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HMGN1P05114 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms