Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.73■□□□□ 0.59
P04436 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.73■□□□□ 0.59
P04436 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
P04436 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
P04436 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.72■□□□□ 0.59
P04436 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
P04436 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.72■□□□□ 0.59
P04436 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.72■□□□□ 0.59
P04436 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.72■□□□□ 0.59
P04436 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.72■□□□□ 0.59
P04436 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
P04436 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.72■□□□□ 0.59
P04436 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
P04436 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.72■□□□□ 0.59
P04436 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04436 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
P04436 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.71■□□□□ 0.59
P04436 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.71■□□□□ 0.59
P04436 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.71■□□□□ 0.59
P04436 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.71■□□□□ 0.59
P04436 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.71■□□□□ 0.59
P04436 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P04436 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 AC121338.2-201ENST00000622535 1744 ntBASIC18.71■□□□□ 0.59
P04436 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P04436 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.71■□□□□ 0.59
P04436 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.71■□□□□ 0.58
P04436 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
P04436 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.7■□□□□ 0.58
P04436 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.7■□□□□ 0.58
P04436 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
P04436 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
P04436 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.7■□□□□ 0.58
P04436 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
P04436 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
P04436 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.7■□□□□ 0.58
P04436 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.7■□□□□ 0.58
P04436 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 FEM1AP4-201ENST00000443167 1987 ntBASIC18.7■□□□□ 0.58
P04436 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04436 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P04436 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
P04436 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.69■□□□□ 0.58
P04436 TSPY20P-201ENST00000450910 630 ntBASIC18.69■□□□□ 0.58
P04436 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.69■□□□□ 0.58
P04436 FAM201B-201ENST00000458407 597 ntBASIC18.69■□□□□ 0.58
P04436 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
P04436 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.69■□□□□ 0.58
P04436 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.69■□□□□ 0.58
P04436 AL356652.1-201ENST00000615962 565 ntBASIC18.69■□□□□ 0.58
P04436 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.69■□□□□ 0.58
P04436 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.69■□□□□ 0.58
P04436 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04436 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms