Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC068338.2-201ENST00000563278 1430 ntBASIC16.09■□□□□ 0.17
TRGV3P03979 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV3P03979 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRGV3P03979 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRGV3P03979 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV3P03979 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.08■□□□□ 0.17
TRGV3P03979 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.08■□□□□ 0.17
TRGV3P03979 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV3P03979 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV3P03979 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
TRGV3P03979 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV3P03979 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRGV3P03979 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV3P03979 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV3P03979 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.07■□□□□ 0.16
TRGV3P03979 CYP2T1P-201ENST00000432607 1285 ntBASIC16.07■□□□□ 0.16
TRGV3P03979 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.07■□□□□ 0.16
TRGV3P03979 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRGV3P03979 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV3P03979 AL162412.1-201ENST00000567129 965 ntBASIC16.07■□□□□ 0.16
TRGV3P03979 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV3P03979 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRGV3P03979 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRGV3P03979 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV3P03979 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TRGV3P03979 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV3P03979 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV3P03979 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRGV3P03979 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV3P03979 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRGV3P03979 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV3P03979 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TRGV3P03979 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV3P03979 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV3P03979 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV3P03979 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV3P03979 MIR663A-201ENST00000385250 93 ntBASIC16.06■□□□□ 0.16
TRGV3P03979 AC006970.2-201ENST00000450065 779 ntBASIC16.06■□□□□ 0.16
TRGV3P03979 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV3P03979 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.06■□□□□ 0.16
TRGV3P03979 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV3P03979 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV3P03979 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV3P03979 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.05■□□□□ 0.16
TRGV3P03979 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV3P03979 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV3P03979 AC016405.3-201ENST00000607710 860 ntBASIC16.05■□□□□ 0.16
TRGV3P03979 FAM21FP-204ENST00000608637 956 ntBASIC16.05■□□□□ 0.16
TRGV3P03979 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV3P03979 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 PLK5-205ENST00000642079 1969 ntBASIC16.05■□□□□ 0.16
TRGV3P03979 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRGV3P03979 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRGV3P03979 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV3P03979 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TRGV3P03979 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV3P03979 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRGV3P03979 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV3P03979 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms