Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-ND3P03897 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.79■□□□□ 0.92
MT-ND3P03897 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 FP700111.2-201ENST00000619190 1892 ntBASIC20.79■□□□□ 0.92
MT-ND3P03897 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-ND3P03897 AC009237.3-201ENST00000393279 1427 ntBASIC20.79■□□□□ 0.92
MT-ND3P03897 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MT-ND3P03897 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MT-ND3P03897 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-ND3P03897 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MT-ND3P03897 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-ND3P03897 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-ND3P03897 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.78■□□□□ 0.92
MT-ND3P03897 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND3P03897 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.78■□□□□ 0.92
MT-ND3P03897 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND3P03897 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND3P03897 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND3P03897 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MT-ND3P03897 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MT-ND3P03897 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-ND3P03897 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-ND3P03897 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
MT-ND3P03897 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MT-ND3P03897 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.77■□□□□ 0.92
MT-ND3P03897 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.77■□□□□ 0.92
MT-ND3P03897 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-ND3P03897 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.77■□□□□ 0.92
MT-ND3P03897 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MT-ND3P03897 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
MT-ND3P03897 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.77■□□□□ 0.92
MT-ND3P03897 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
MT-ND3P03897 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.77■□□□□ 0.92
MT-ND3P03897 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MT-ND3P03897 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-ND3P03897 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
MT-ND3P03897 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MT-ND3P03897 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
MT-ND3P03897 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.76■□□□□ 0.91
MT-ND3P03897 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
MT-ND3P03897 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MT-ND3P03897 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.76■□□□□ 0.91
MT-ND3P03897 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 AC055733.4-201ENST00000638462 1354 ntBASIC20.76■□□□□ 0.91
MT-ND3P03897 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 AC090192.1-201ENST00000517740 490 ntBASIC20.76■□□□□ 0.91
MT-ND3P03897 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.76■□□□□ 0.91
MT-ND3P03897 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.76■□□□□ 0.91
MT-ND3P03897 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.76■□□□□ 0.91
MT-ND3P03897 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.76■□□□□ 0.91
MT-ND3P03897 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MT-ND3P03897 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-ND3P03897 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MT-ND3P03897 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms