Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.25■□□□□ 0.67
PLOD3O60568 AC022517.1-201ENST00000592429 346 ntBASIC19.25■□□□□ 0.67
PLOD3O60568 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PLOD3O60568 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
PLOD3O60568 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PLOD3O60568 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PLOD3O60568 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PLOD3O60568 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PLOD3O60568 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.25■□□□□ 0.67
PLOD3O60568 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PLOD3O60568 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 MFSD11-216ENST00000590393 1141 ntBASIC19.24■□□□□ 0.67
PLOD3O60568 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.24■□□□□ 0.67
PLOD3O60568 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PLOD3O60568 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PLOD3O60568 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PLOD3O60568 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PLOD3O60568 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.23■□□□□ 0.67
PLOD3O60568 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.23■□□□□ 0.67
PLOD3O60568 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.23■□□□□ 0.67
PLOD3O60568 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 AC007322.4-201ENST00000509611 723 ntBASIC19.23■□□□□ 0.67
PLOD3O60568 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.23■□□□□ 0.67
PLOD3O60568 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
PLOD3O60568 AC013268.1-206ENST00000638368 961 ntBASIC19.23■□□□□ 0.67
PLOD3O60568 AC112229.1-201ENST00000639295 961 ntBASIC19.23■□□□□ 0.67
PLOD3O60568 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PLOD3O60568 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PLOD3O60568 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.23■□□□□ 0.67
PLOD3O60568 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PLOD3O60568 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PLOD3O60568 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.22■□□□□ 0.67
PLOD3O60568 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.22■□□□□ 0.67
PLOD3O60568 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PLOD3O60568 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.22■□□□□ 0.67
PLOD3O60568 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.22■□□□□ 0.67
PLOD3O60568 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PLOD3O60568 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.22■□□□□ 0.67
PLOD3O60568 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.22■□□□□ 0.67
PLOD3O60568 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.21■□□□□ 0.67
PLOD3O60568 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.21■□□□□ 0.67
PLOD3O60568 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.21■□□□□ 0.67
PLOD3O60568 AC007322.3-201ENST00000426526 701 ntBASIC19.21■□□□□ 0.67
PLOD3O60568 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.21■□□□□ 0.67
PLOD3O60568 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.21■□□□□ 0.67
PLOD3O60568 AL162412.1-201ENST00000567129 965 ntBASIC19.21■□□□□ 0.67
PLOD3O60568 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.21■□□□□ 0.67
PLOD3O60568 AL591742.1-201ENST00000604433 565 ntBASIC19.21■□□□□ 0.67
PLOD3O60568 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.21■□□□□ 0.67
PLOD3O60568 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.21■□□□□ 0.67
PLOD3O60568 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PLOD3O60568 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PLOD3O60568 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PLOD3O60568 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PLOD3O60568 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms