Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC28A2O43868 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC28A2O43868 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SLC28A2O43868 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC28A2O43868 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC28A2O43868 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A2O43868 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC28A2O43868 AC009237.3-201ENST00000393279 1427 ntBASIC19.66■□□□□ 0.74
SLC28A2O43868 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A2O43868 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC28A2O43868 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC28A2O43868 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC28A2O43868 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A2O43868 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A2O43868 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC28A2O43868 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A2O43868 AL049796.1-201ENST00000565336 1766 ntBASIC19.65■□□□□ 0.74
SLC28A2O43868 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC28A2O43868 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
SLC28A2O43868 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A2O43868 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A2O43868 CYP2T1P-201ENST00000432607 1285 ntBASIC19.64■□□□□ 0.73
SLC28A2O43868 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A2O43868 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC28A2O43868 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC28A2O43868 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC28A2O43868 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A2O43868 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A2O43868 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A2O43868 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A2O43868 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC28A2O43868 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC28A2O43868 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC28A2O43868 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC28A2O43868 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SLC28A2O43868 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 AC097658.1-201ENST00000475555 843 ntBASIC19.63■□□□□ 0.73
SLC28A2O43868 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 AC083880.1-201ENST00000608266 535 ntBASIC19.63■□□□□ 0.73
SLC28A2O43868 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC28A2O43868 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC28A2O43868 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC28A2O43868 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC28A2O43868 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC28A2O43868 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC28A2O43868 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC28A2O43868 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC28A2O43868 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC28A2O43868 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC28A2O43868 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 MIR718-201ENST00000390190 70 ntBASIC19.62■□□□□ 0.73
SLC28A2O43868 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC28A2O43868 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.62■□□□□ 0.73
SLC28A2O43868 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms