Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.86■□□□□ 0.61
ARHGEF9O43307 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF9O43307 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 BX005040.4-201ENST00000637145 1518 ntBASIC18.85■□□□□ 0.61
ARHGEF9O43307 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.85■□□□□ 0.61
ARHGEF9O43307 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ARHGEF9O43307 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 AC005224.4-201ENST00000583262 1652 ntBASIC18.84■□□□□ 0.61
ARHGEF9O43307 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.84■□□□□ 0.61
ARHGEF9O43307 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ARHGEF9O43307 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF9O43307 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF9O43307 AC055733.4-201ENST00000638462 1354 ntBASIC18.83■□□□□ 0.61
ARHGEF9O43307 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF9O43307 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF9O43307 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ARHGEF9O43307 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ARHGEF9O43307 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF9O43307 AC137761.2-201ENST00000561729 223 ntBASIC18.83■□□□□ 0.6
ARHGEF9O43307 AC145350.3-201ENST00000569033 163 ntBASIC18.83■□□□□ 0.6
ARHGEF9O43307 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF9O43307 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF9O43307 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF9O43307 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ARHGEF9O43307 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF9O43307 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
ARHGEF9O43307 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.83■□□□□ 0.6
ARHGEF9O43307 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ARHGEF9O43307 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.83■□□□□ 0.6
ARHGEF9O43307 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF9O43307 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.82■□□□□ 0.6
ARHGEF9O43307 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ARHGEF9O43307 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ARHGEF9O43307 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ARHGEF9O43307 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ARHGEF9O43307 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.82■□□□□ 0.6
ARHGEF9O43307 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms