Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA1O15239 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA1O15239 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA1O15239 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA1O15239 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NDUFA1O15239 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA1O15239 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA1O15239 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA1O15239 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA1O15239 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NDUFA1O15239 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA1O15239 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA1O15239 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA1O15239 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFA1O15239 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFA1O15239 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 AL136116.3-201ENST00000402907 1138 ntBASIC13.96□□□□□ -0.17
NDUFA1O15239 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.96□□□□□ -0.17
NDUFA1O15239 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.96□□□□□ -0.17
NDUFA1O15239 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFA1O15239 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.96□□□□□ -0.17
NDUFA1O15239 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFA1O15239 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA1O15239 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
NDUFA1O15239 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.96□□□□□ -0.18
NDUFA1O15239 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA1O15239 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.96□□□□□ -0.18
NDUFA1O15239 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFA1O15239 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.95□□□□□ -0.18
NDUFA1O15239 AP006587.3-201ENST00000525742 1516 ntBASIC13.95□□□□□ -0.18
NDUFA1O15239 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA1O15239 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NDUFA1O15239 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NDUFA1O15239 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NDUFA1O15239 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFA1O15239 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.95□□□□□ -0.18
NDUFA1O15239 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.95□□□□□ -0.18
NDUFA1O15239 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.95□□□□□ -0.18
NDUFA1O15239 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NDUFA1O15239 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NDUFA1O15239 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 FP700111.2-201ENST00000619190 1892 ntBASIC13.95□□□□□ -0.18
NDUFA1O15239 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NDUFA1O15239 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFA1O15239 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.95□□□□□ -0.18
NDUFA1O15239 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.94□□□□□ -0.18
NDUFA1O15239 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NDUFA1O15239 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms