Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM38O00635 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM38O00635 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM38O00635 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM38O00635 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM38O00635 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 PRORSD1P-201ENST00000295112 541 ntBASIC20.54■□□□□ 0.88
TRIM38O00635 AC093827.2-201ENST00000512654 315 ntBASIC20.54■□□□□ 0.88
TRIM38O00635 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM38O00635 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM38O00635 MYC-209ENST00000641252 345 ntBASIC20.54■□□□□ 0.88
TRIM38O00635 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM38O00635 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM38O00635 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM38O00635 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM38O00635 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRIM38O00635 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM38O00635 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM38O00635 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM38O00635 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM38O00635 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM38O00635 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.53■□□□□ 0.88
TRIM38O00635 AL591742.1-201ENST00000604433 565 ntBASIC20.53■□□□□ 0.88
TRIM38O00635 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM38O00635 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM38O00635 AC061975.6-201ENST00000579045 1553 ntBASIC20.53■□□□□ 0.88
TRIM38O00635 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM38O00635 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM38O00635 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM38O00635 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM38O00635 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM38O00635 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM38O00635 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM38O00635 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 RARRES2P4-201ENST00000514074 484 ntBASIC20.52■□□□□ 0.88
TRIM38O00635 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM38O00635 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM38O00635 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM38O00635 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM38O00635 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TRIM38O00635 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM38O00635 AC010980.2-201ENST00000587099 1412 ntBASIC20.52■□□□□ 0.87
TRIM38O00635 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TRIM38O00635 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM38O00635 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRIM38O00635 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM38O00635 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 AC097658.1-201ENST00000475555 843 ntBASIC20.51■□□□□ 0.87
TRIM38O00635 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM38O00635 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM38O00635 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM38O00635 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.51■□□□□ 0.87
TRIM38O00635 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.51■□□□□ 0.87
TRIM38O00635 AL162412.1-201ENST00000567129 965 ntBASIC20.51■□□□□ 0.87
TRIM38O00635 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRIM38O00635 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TRIM38O00635 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM38O00635 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM38O00635 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM38O00635 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIM38O00635 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM38O00635 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms