Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 BX005040.4-201ENST00000637145 1518 ntBASIC20.9■□□□□ 0.94
SMIM23A6NLE4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.9■□□□□ 0.94
SMIM23A6NLE4 AL512631.2-201ENST00000604634 923 ntBASIC20.9■□□□□ 0.94
SMIM23A6NLE4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 SMG8-203ENST00000578922 2178 ntBASIC20.9■□□□□ 0.94
SMIM23A6NLE4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 AC120498.9-201ENST00000339021 3867 ntBASIC20.9■□□□□ 0.94
SMIM23A6NLE4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM23A6NLE4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMIM23A6NLE4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.89■□□□□ 0.94
SMIM23A6NLE4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.89■□□□□ 0.94
SMIM23A6NLE4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SMIM23A6NLE4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM23A6NLE4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 AL138724.1-201ENST00000606771 1088 ntBASIC20.88■□□□□ 0.93
SMIM23A6NLE4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 TCF3P1-201ENST00000423021 1937 ntBASIC20.88■□□□□ 0.93
SMIM23A6NLE4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM23A6NLE4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM23A6NLE4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM23A6NLE4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM23A6NLE4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM23A6NLE4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms