Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 AC005224.4-201ENST00000583262 1652 ntBASIC17.45■□□□□ 0.38
TMEM235A6NFC5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM235A6NFC5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 BX842568.3-201ENST00000418104 571 ntBASIC17.44■□□□□ 0.38
TMEM235A6NFC5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TMEM235A6NFC5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 AL020996.1-203ENST00000536896 2307 ntBASIC17.43■□□□□ 0.38
TMEM235A6NFC5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM235A6NFC5 AC116562.4-201ENST00000641316 2276 ntBASIC17.42■□□□□ 0.38
TMEM235A6NFC5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM235A6NFC5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 AC126544.1-201ENST00000580842 1059 ntBASIC17.41■□□□□ 0.38
TMEM235A6NFC5 MIR4767-201ENST00000582827 78 ntBASIC17.41■□□□□ 0.38
TMEM235A6NFC5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM235A6NFC5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM235A6NFC5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms