Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 AC026471.5-201ENST00000615068 467 ntBASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PLEKHD1A6NEE1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PLEKHD1A6NEE1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PLEKHD1A6NEE1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.77■■■□□ 2.68
PLEKHD1A6NEE1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
PLEKHD1A6NEE1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PLEKHD1A6NEE1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PLEKHD1A6NEE1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.76■■■□□ 2.68
PLEKHD1A6NEE1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 AP003071.4-201ENST00000562276 1284 ntBASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PLEKHD1A6NEE1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.75■■■□□ 2.67
PLEKHD1A6NEE1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 CD177P1-201ENST00000606252 935 ntBASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PLEKHD1A6NEE1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
PLEKHD1A6NEE1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
PLEKHD1A6NEE1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms