Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 AL121603.2-201ENST00000557373 2117 ntBASIC20.7■□□□□ 0.9
CCDC78A2IDD5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 MYCNOS-205ENST00000641950 531 ntBASIC20.7■□□□□ 0.9
CCDC78A2IDD5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 LINC01521-201ENST00000504184 1943 ntBASIC20.7■□□□□ 0.9
CCDC78A2IDD5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 RBM17P2-201ENST00000616397 1405 ntBASIC20.7■□□□□ 0.9
CCDC78A2IDD5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC78A2IDD5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC78A2IDD5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 AP005212.1-201ENST00000581547 1997 ntBASIC20.68■□□□□ 0.9
CCDC78A2IDD5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 AC137761.2-201ENST00000561729 223 ntBASIC20.68■□□□□ 0.9
CCDC78A2IDD5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 AC145350.3-201ENST00000569033 163 ntBASIC20.68■□□□□ 0.9
CCDC78A2IDD5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC78A2IDD5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC78A2IDD5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 AC091799.1-201ENST00000422823 811 ntBASIC20.66■□□□□ 0.9
CCDC78A2IDD5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC78A2IDD5 AL162430.1-201ENST00000480705 870 ntBASIC20.66■□□□□ 0.9
CCDC78A2IDD5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms