Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.45■■□□□ 1.02
TCRBV5S1A1TA0A578 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 AC092720.2-201ENST00000602388 1665 ntBASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 MIR935-201ENST00000401179 91 ntBASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 BID-214ENST00000617586 542 ntTSL 5 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV5S1A1TA0A578 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 CYP21A1P-202ENST00000354927 1481 ntBASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV5S1A1TA0A578 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 RARRES2P4-201ENST00000514074 484 ntBASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 IKBKGP1-201ENST00000612193 1073 ntBASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.42■■□□□ 1.02
TCRBV5S1A1TA0A578 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 AC087633.2-202ENST00000565166 1439 ntBASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.41■■□□□ 1.02
TCRBV5S1A1TA0A578 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.4■■□□□ 1.02
TCRBV5S1A1TA0A578 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms