Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.6■□□□□ 0.89
TCRBV9S1A1TA0A576 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 IRS3P-201ENST00000223076 1006 ntBASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 MIR2861-201ENST00000636310 90 ntBASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 AC116050.2-201ENST00000612102 1779 ntBASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV9S1A1TA0A576 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 AL139246.5-201ENST00000606645 996 ntBASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 AC120498.10-201ENST00000621827 505 ntBASIC20.58■□□□□ 0.89
TCRBV9S1A1TA0A576 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 SMG8-203ENST00000578922 2178 ntBASIC20.58■□□□□ 0.88
TCRBV9S1A1TA0A576 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV9S1A1TA0A576 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 AC027612.3-201ENST00000413684 1047 ntBASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 AC142381.2-201ENST00000566120 298 ntBASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TCRBV9S1A1TA0A576 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV9S1A1TA0A576 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms