Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 AC092118.2-201ENST00000613495 667 ntBASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV25A0A0B4J276 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.39■□□□□ 0.06
TRAV25A0A0B4J276 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 MIPEPP3-201ENST00000412105 444 ntBASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 GUSBP6-202ENST00000438529 1198 ntBASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 AC142086.2-201ENST00000569753 217 ntBASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 AC133041.1-202ENST00000642053 222 ntBASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV25A0A0B4J276 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 BX276092.2-201ENST00000417668 665 ntBASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 AL138781.1-201ENST00000566567 1274 ntBASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV25A0A0B4J276 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 AL356652.1-201ENST00000615962 565 ntBASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 MIR2861-201ENST00000636310 90 ntBASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV25A0A0B4J276 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms