Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 NEDD1-203ENST00000429527 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NPIPA3F8WFD2 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 HSPA8P16-201ENST00000454171 1865 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AL023280.1-201ENST00000414840 1423 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AL031864.1-201ENST00000392075 423 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 RN7SKP112-201ENST00000411213 318 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 Z98751.1-201ENST00000413827 381 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 CYCSP5-201ENST00000415043 297 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 RPL26P34-201ENST00000431005 451 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 IFITM4P-207ENST00000441380 420 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 CENPS-202ENST00000462462 584 ntTSL 3 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AC034207.1-201ENST00000506742 948 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AC093281.1-201ENST00000514239 549 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AC079322.1-201ENST00000568345 1135 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 RN7SL353P-201ENST00000579902 252 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 BX510359.8-201ENST00000617713 296 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 LINC00032-201ENST00000638495 1040 ntBASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 LINC00265-201ENST00000340510 3049 ntTSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NPIPA3F8WFD2 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 CHODL-204ENST00000400128 2421 ntTSL 2 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 TPT1P4-201ENST00000403538 519 ntBASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 TRIM26BP-206ENST00000427723 753 ntBASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AC009495.1-201ENST00000428888 372 ntTSL 5 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NPIPA3F8WFD2 AP000459.1-201ENST00000433101 861 ntTSL 3 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms