Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 DSTNP2-202ENST00000602547 1105 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC137695.1-201ENST00000604126 489 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 MIR6848-201ENST00000611213 70 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 PRB4-204ENST00000621732 709 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC027575.4-201ENST00000622010 586 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 LINC01002-213ENST00000632086 918 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC079777.1-201ENST00000623836 1953 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 ZSCAN31-219ENST00000611469 2669 ntTSL 4 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 OR6C6-201ENST00000358433 1521 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AL022322.1-201ENST00000609162 1433 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC098614.1-202ENST00000634895 1830 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC131649.2-201ENST00000624925 4439 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AL353807.3-201ENST00000500626 2505 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 SPRR4-201ENST00000328051 733 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 RN7SKP294-201ENST00000362770 338 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 C10orf82-201ENST00000369210 994 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 TMEM59-203ENST00000371341 1116 ntTSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 SLC25A5P4-201ENST00000418448 869 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 FAM236D-201ENST00000419795 433 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC009495.1-201ENST00000428888 372 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC104088.1-201ENST00000445613 510 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 POLR3KP1-201ENST00000449146 342 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 FAM236D-202ENST00000458170 451 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC020658.1-201ENST00000471253 938 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC124276.2-201ENST00000527997 550 ntTSL 3 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 OR7E4P-201ENST00000530317 1013 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AP001767.1-201ENST00000530976 286 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AP003396.2-201ENST00000533726 1297 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 OAS1-211ENST00000553185 664 ntTSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 C14orf166-206ENST00000556760 851 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC113189.3-201ENST00000576615 330 ntTSL 3 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC111188.3-201ENST00000604663 307 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 PACERR-201ENST00000608917 825 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 AC025268.1-201ENST00000632192 1199 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 FAM236C-202ENST00000636532 451 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 BLNK-202ENST00000371176 1715 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 MAPK10-343ENST00000641677 2546 ntBASIC8.26□□□□□ -1.09
SNX18Q96RF0 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
SNX18Q96RF0 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SNX18Q96RF0 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 HMGCLL1-206ENST00000428842 2437 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 CASC15-203ENST00000605917 4461 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 FCRLA-207ENST00000367950 823 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SNX18Q96RF0 MRPS18BP1-201ENST00000414228 192 ntBASIC8.25□□□□□ -1.09
SNX18Q96RF0 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 AF241728.1-201ENST00000432359 1180 ntTSL 5 BASIC8.25□□□□□ -1.09
SNX18Q96RF0 MRPL21-202ENST00000450904 662 ntTSL 2 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms