Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NPM1P32-201ENST00000412580 604 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 CD59-204ENST00000426650 741 ntAPPRIS P2 TSL 3 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC008069.1-201ENST00000444710 950 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 CT45A11P-201ENST00000448043 1134 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 RN7SL169P-201ENST00000485643 289 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 PRSS1-204ENST00000486171 803 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AF131215.1-201ENST00000488887 520 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AK4P2-201ENST00000504372 670 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 LDHBP3-201ENST00000514909 822 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AP003385.4-201ENST00000524977 324 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 BOLA3P1-201ENST00000530713 355 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 GS1-24F4.2-202ENST00000531701 380 ntTSL 3 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC084357.3-202ENST00000543539 679 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 PMM2-213ENST00000566983 907 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 RN7SL321P-201ENST00000581742 299 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AC060766.4-201ENST00000592117 537 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ZNF675-207ENST00000600313 543 ntTSL 4 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 LINC00649-212ENST00000601471 538 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 RFPL3-AS1_1.2-201ENST00000618747 88 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 SMIM11B-204ENST00000623661 1021 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 LINC00032-201ENST00000638495 1040 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AL031291.1-201ENST00000641979 742 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AP003972.1-201ENST00000625192 5446 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 AL121936.1-201ENST00000641660 2884 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 CU634019.3-201ENST00000623962 2456 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 FP236315.2-201ENST00000624506 2456 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 FP671120.2-201ENST00000624806 2456 ntBASIC8.28□□□□□ -1.08
SNX18Q96RF0 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 KANSL2-201ENST00000420613 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 SELE-202ENST00000367774 1518 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 GDNF-AS1-204ENST00000637595 1886 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 NPIPB6-202ENST00000533640 1329 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNX18Q96RF0 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.28□□□□□ -1.08
SNX18Q96RF0 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC8.27□□□□□ -1.08
SNX18Q96RF0 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
SNX18Q96RF0 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SNX18Q96RF0 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SNX18Q96RF0 MIA3-202ENST00000344507 2026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 MAPK10-285ENST00000641207 2746 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 WBP11P1-202ENST00000567636 2972 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 ZFP57-201ENST00000376881 1359 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 GLYATL3-201ENST00000371197 1113 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 TCEANC2-202ENST00000371331 936 ntTSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 SNORA48-201ENST00000386847 135 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 BPI-202ENST00000417318 1082 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC245884.5-201ENST00000417373 170 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 PRDX3P1-201ENST00000418695 763 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 OR14L1P-201ENST00000419087 918 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 RPL29P28-201ENST00000421928 472 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC084851.3-201ENST00000432771 573 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 PPP1R2P2-201ENST00000440405 613 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 SSU72P1-201ENST00000449911 583 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 COX5BP6-201ENST00000454311 211 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 RPL29P25-201ENST00000465069 850 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 ENPP7P4-201ENST00000487446 1086 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 IGKV1-17-201ENST00000490686 378 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC008696.1-201ENST00000502593 615 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 GPN1-209ENST00000503738 984 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AC093857.1-201ENST00000511603 760 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 MTND2P7-201ENST00000521337 640 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 WTAPP1-203ENST00000537774 400 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 FTLP14-201ENST00000562087 484 ntBASIC8.27□□□□□ -1.09
SNX18Q96RF0 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNX18Q96RF0 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC8.27□□□□□ -1.09
SNX18Q96RF0 AL161725.1-212ENST00000585819 745 ntTSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms