Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 AL133406.1-201ENST00000404904 747 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 SSR1P1-201ENST00000407630 814 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 NFU1P1-201ENST00000413128 774 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 CHCHD2P5-201ENST00000421414 400 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 E2F4P1-201ENST00000422443 1133 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 GGTA1P-204ENST00000488429 1104 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
MTHFRP42898 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC9.54□□□□□ -0.88
MTHFRP42898 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 NPIPA3-201ENST00000526520 954 ntTSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 NPIPA2-201ENST00000529166 1110 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 NPIPA2-202ENST00000530328 954 ntTSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 NPIPA5-202ENST00000534094 954 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
MTHFRP42898 TP53TG3HP-201ENST00000563487 346 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 AC015818.2-201ENST00000563569 840 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC9.54□□□□□ -0.88
MTHFRP42898 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 AF146191.1-201ENST00000604941 889 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 GZMB-209ENST00000616551 559 ntTSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 AL662791.5-201ENST00000623334 466 ntTSL 3 BASIC9.54□□□□□ -0.88
MTHFRP42898 AC008895.1-201ENST00000624074 2622 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 AC244034.3-201ENST00000624347 3135 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 AC112512.1-201ENST00000398957 1428 ntTSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 MFSD8-259ENST00000642042 2303 ntBASIC9.54□□□□□ -0.88
MTHFRP42898 NBPF22P-202ENST00000590707 1580 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
MTHFRP42898 CD200-202ENST00000383681 1997 ntTSL 2 BASIC9.54□□□□□ -0.88
MTHFRP42898 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 TIGIT-203ENST00000481065 3710 ntTSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 PRYP4-201ENST00000306589 444 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC9.53□□□□□ -0.88
MTHFRP42898 TRBV7-5-201ENST00000390382 345 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 RPL35P3-201ENST00000403133 371 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 RN7SKP169-201ENST00000411124 291 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 AC092066.1-201ENST00000425131 317 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 RN7SL630P-201ENST00000483714 297 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 MYL5-205ENST00000505477 584 ntTSL 3 BASIC9.53□□□□□ -0.88
MTHFRP42898 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC9.53□□□□□ -0.88
MTHFRP42898 MRPL45P2-203ENST00000573318 473 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 AC090774.3-201ENST00000578666 742 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC9.53□□□□□ -0.88
MTHFRP42898 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 PRYP3-202ENST00000607210 444 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 SPDYE20P-201ENST00000616891 632 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 GHR-212ENST00000620156 4529 ntTSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC9.53□□□□□ -0.88
MTHFRP42898 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 HSPA8P16-201ENST00000454171 1865 ntBASIC9.53□□□□□ -0.88
MTHFRP42898 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
MTHFRP42898 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 AL132655.3-201ENST00000603095 1619 ntTSL 2 BASIC9.53□□□□□ -0.88
MTHFRP42898 ACSBG2-206ENST00000588485 2478 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
MTHFRP42898 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
MTHFRP42898 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC9.52□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms