Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL353705.3-201ENST00000418694 1250 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 RPL17P1-201ENST00000445304 536 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 AC073551.1-201ENST00000450741 834 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC9.4□□□□□ -0.9
SLC1A1P43005 AC136628.1-201ENST00000503218 561 ntTSL 4 BASIC9.4□□□□□ -0.9
SLC1A1P43005 AC026704.1-201ENST00000506435 770 ntTSL 3 BASIC9.4□□□□□ -0.9
SLC1A1P43005 LINC01606-206ENST00000520929 411 ntTSL 3 BASIC9.4□□□□□ -0.9
SLC1A1P43005 SSPN-207ENST00000540266 587 ntTSL 4 BASIC9.4□□□□□ -0.9
SLC1A1P43005 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC9.4□□□□□ -0.9
SLC1A1P43005 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 AC118754.2-201ENST00000574133 537 ntTSL 4 BASIC9.4□□□□□ -0.9
SLC1A1P43005 RN7SL408P-201ENST00000577207 296 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 LINC00629-202ENST00000592070 844 ntTSL 3 BASIC9.4□□□□□ -0.9
SLC1A1P43005 MIR6742-201ENST00000622338 62 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 NELFE-214ENST00000625905 111 ntTSL 5 BASIC9.4□□□□□ -0.9
SLC1A1P43005 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC9.4□□□□□ -0.9
SLC1A1P43005 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 AC008895.1-201ENST00000624074 2622 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SLC1A1P43005 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SLC1A1P43005 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SLC1A1P43005 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
SLC1A1P43005 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SLC1A1P43005 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SLC1A1P43005 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 OR4K1-202ENST00000641172 1339 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SLC1A1P43005 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SLC1A1P43005 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 GDNF-AS1-204ENST00000637595 1886 ntTSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 CALCA-202ENST00000361010 916 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 RNU4-8P-201ENST00000364936 141 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
SLC1A1P43005 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC9.39□□□□□ -0.91
SLC1A1P43005 AL121892.1-201ENST00000422574 833 ntTSL 3 BASIC9.39□□□□□ -0.91
SLC1A1P43005 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 RPL12P29-201ENST00000425565 457 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 FTLP2-201ENST00000431458 528 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL370P-201ENST00000470869 295 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 HSPD1P18-201ENST00000504252 244 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC9.39□□□□□ -0.91
SLC1A1P43005 CARD8-224ENST00000522431 622 ntTSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
SLC1A1P43005 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC9.39□□□□□ -0.91
SLC1A1P43005 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 AC048337.1-201ENST00000557474 552 ntTSL 4 BASIC9.39□□□□□ -0.91
SLC1A1P43005 OR11K1P-201ENST00000558299 904 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 AP006565.1-201ENST00000581117 586 ntTSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 EIF3K-211ENST00000592558 670 ntTSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 STX8P1-201ENST00000603161 355 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 HAR1B-202ENST00000608031 773 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 GOLGA6L17P-201ENST00000611297 586 ntTSL 4 BASIC9.39□□□□□ -0.91
SLC1A1P43005 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 MIR6892-201ENST00000612346 115 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL428P-201ENST00000613848 247 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL673P-201ENST00000616262 237 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL495P-201ENST00000616925 237 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL331P-201ENST00000618054 247 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL719P-201ENST00000620196 237 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 RN7SL469P-201ENST00000621501 237 ntBASIC9.39□□□□□ -0.91
SLC1A1P43005 LINC00282-201ENST00000626362 654 ntAPPRIS P5 TSL 4 BASIC9.39□□□□□ -0.91
SLC1A1P43005 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 ACSM6-202ENST00000341686 1712 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SLC1A1P43005 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 HCRTR2-202ENST00000615358 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SLC1A1P43005 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.39□□□□□ -0.91
SLC1A1P43005 AC008522.1-201ENST00000639479 2906 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
SLC1A1P43005 AP001020.2-201ENST00000581712 1605 ntBASIC9.38□□□□□ -0.91
SLC1A1P43005 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SLC1A1P43005 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC9.38□□□□□ -0.91
SLC1A1P43005 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms