Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 MARK3-207ENST00000553942 2298 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC020658.3-201ENST00000568093 4028 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 RNA5SP349-201ENST00000363743 109 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 RPL12P15-201ENST00000433385 499 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 AC009948.2-201ENST00000437039 713 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 RPE-216ENST00000454822 2130 ntTSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 PDPN-204ENST00000475043 849 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC011632.1-201ENST00000523860 773 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC136443.2-201ENST00000528546 258 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC9.42□□□□□ -0.9
SLC1A1P43005 LINC02328-201ENST00000553668 741 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC023034.2-201ENST00000559428 476 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC136619.1-201ENST00000564015 258 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AC011416.3-201ENST00000603971 355 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 TRAM2-AS1-202ENST00000605910 1053 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 MIR6848-201ENST00000611213 70 ntBASIC9.42□□□□□ -0.9
SLC1A1P43005 CCL17-202ENST00000616880 550 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SLC1A1P43005 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 AL358790.1-202ENST00000632794 583 ntTSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC9.42□□□□□ -0.9
SLC1A1P43005 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SLC1A1P43005 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
SLC1A1P43005 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 OR52B5P-203ENST00000641694 1313 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AC005722.2-201ENST00000577087 3370 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 AURKC-202ENST00000415300 978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 CARM1P1-201ENST00000426329 1185 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 RPL7AP50-201ENST00000452821 795 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC084017.1-201ENST00000483240 860 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AL590867.2-201ENST00000492974 447 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 RN7SL538P-201ENST00000494227 304 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AC126182.2-201ENST00000496098 339 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 RPSAP74-201ENST00000522047 393 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC9.41□□□□□ -0.9
SLC1A1P43005 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC9.41□□□□□ -0.9
SLC1A1P43005 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC090531.1-201ENST00000547168 923 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC106788.1-202ENST00000548889 1212 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 OR4K4P-201ENST00000556991 684 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AC141586.2-201ENST00000565111 572 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC093525.5-201ENST00000569220 572 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC135048.2-201ENST00000572471 561 ntTSL 4 BASIC9.41□□□□□ -0.9
SLC1A1P43005 MIR3150B-201ENST00000580142 86 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC9.41□□□□□ -0.9
SLC1A1P43005 DYNLL1P3-201ENST00000596113 266 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AURKC-207ENST00000599062 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 AC034198.2-201ENST00000606447 510 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AL590491.1-202ENST00000618038 394 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 AC141557.2-201ENST00000621330 482 ntBASIC9.41□□□□□ -0.9
SLC1A1P43005 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC9.41□□□□□ -0.9
SLC1A1P43005 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
SLC1A1P43005 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC9.41□□□□□ -0.9
SLC1A1P43005 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SLC1A1P43005 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC9.4□□□□□ -0.9
SLC1A1P43005 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
SLC1A1P43005 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
SLC1A1P43005 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 OR56B4-201ENST00000316529 1152 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
SLC1A1P43005 SNORA71A-201ENST00000364729 134 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SLC1A1P43005 MIR629-201ENST00000385230 97 ntBASIC9.4□□□□□ -0.9
SLC1A1P43005 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms