Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC9.6□□□□□ -0.87
MTHFRP42898 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
MTHFRP42898 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MTHFRP42898 GNL3LP1-201ENST00000399458 1643 ntBASIC9.6□□□□□ -0.87
MTHFRP42898 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 AC120036.5-201ENST00000528139 2491 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 OR5E1P-201ENST00000305754 927 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
MTHFRP42898 PLGLB1-201ENST00000355705 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
MTHFRP42898 OR2T4-202ENST00000366475 1047 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 VTA1-201ENST00000367621 1284 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 AP000532.1-201ENST00000440999 177 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 TARDBPP2-201ENST00000448913 1231 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 PPIAP28-201ENST00000458378 485 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 TUBB3P2-201ENST00000480063 232 ntBASIC9.59□□□□□ -0.87
MTHFRP42898 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC9.59□□□□□ -0.87
MTHFRP42898 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC9.59□□□□□ -0.87
MTHFRP42898 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC9.59□□□□□ -0.87
MTHFRP42898 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 DNASE1-201ENST00000246949 4200 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MTHFRP42898 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC9.59□□□□□ -0.87
MTHFRP42898 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
MTHFRP42898 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.88
MTHFRP42898 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
MTHFRP42898 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 IPO5P1-201ENST00000593576 2887 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC9.58□□□□□ -0.88
MTHFRP42898 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
MTHFRP42898 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
MTHFRP42898 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.58□□□□□ -0.88
MTHFRP42898 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 AC020661.5-201ENST00000624853 1854 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC9.58□□□□□ -0.88
MTHFRP42898 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
MTHFRP42898 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 AKR1D1-201ENST00000242375 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 OR52E4-201ENST00000316987 1027 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
MTHFRP42898 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MTHFRP42898 RNA5SP69-201ENST00000364477 117 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 RNVU1-7-201ENST00000383858 164 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 PDCL3P7-201ENST00000392251 712 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 TUBBP9-201ENST00000405234 1099 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 HCG24-202ENST00000414398 717 ntTSL 3 BASIC9.58□□□□□ -0.88
MTHFRP42898 AC074033.1-201ENST00000418623 410 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC9.58□□□□□ -0.88
MTHFRP42898 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC9.58□□□□□ -0.88
MTHFRP42898 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC9.58□□□□□ -0.88
MTHFRP42898 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC9.58□□□□□ -0.88
MTHFRP42898 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC9.58□□□□□ -0.88
MTHFRP42898 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC9.58□□□□□ -0.88
MTHFRP42898 FDPSP4-201ENST00000534629 1049 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms