Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 PPIE-201ENST00000324379 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 CFTRP3-201ENST00000376400 212 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 MIR296-201ENST00000385215 80 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC005005.1-201ENST00000397595 682 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AL590133.1-201ENST00000412838 368 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC005006.1-201ENST00000432130 249 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AL022318.1-201ENST00000450216 678 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 GAPDHP50-201ENST00000464421 993 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 RN7SL798P-201ENST00000468562 301 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AL451124.1-201ENST00000478520 1026 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 RN7SL586P-201ENST00000479137 296 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 DPH3P1-201ENST00000486648 249 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 RPL29P11-201ENST00000494408 492 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 RPL26L1-206ENST00000521476 742 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC120036.4-201ENST00000521874 256 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC136443.3-201ENST00000546674 676 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 LINC02396-203ENST00000551922 525 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 ADSSL1-210ENST00000556623 652 ntTSL 3 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AP001005.2-201ENST00000575066 763 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 RN7SL493P-201ENST00000580401 299 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 RN7SL557P-201ENST00000581047 286 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC016629.3-202ENST00000596427 890 ntTSL 2 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 U62317.5-201ENST00000609268 362 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 SPDYE20P-201ENST00000616891 632 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AL354751.3-201ENST00000618526 1027 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AL391095.3-201ENST00000621084 720 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC004678.2-201ENST00000623695 1002 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 LAMTOR5-AS1-246ENST00000630298 858 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC106774.9-201ENST00000638668 597 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC233724.17-201ENST00000639073 597 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 AC106774.8-201ENST00000639081 597 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNX18Q96RF0 YWHAQP5-201ENST00000415616 1382 ntBASIC8.34□□□□□ -1.07
SNX18Q96RF0 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.34□□□□□ -1.07
SNX18Q96RF0 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
SNX18Q96RF0 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
SNX18Q96RF0 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
SNX18Q96RF0 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
SNX18Q96RF0 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
SNX18Q96RF0 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.08
SNX18Q96RF0 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AL078645.2-201ENST00000245811 1325 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 SNORA64.2-201ENST00000362696 132 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 RNA5SP379-201ENST00000364599 113 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 RAET1E-202ENST00000367363 817 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNX18Q96RF0 TPM3P6-201ENST00000391998 742 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 AL139095.2-201ENST00000407940 730 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 SNORA77.1-201ENST00000408156 125 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 RN7SKP252-201ENST00000411210 327 ntBASIC8.33□□□□□ -1.08
SNX18Q96RF0 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AL139246.3-201ENST00000424215 626 ntTSL 5 BASIC8.33□□□□□ -1.08
SNX18Q96RF0 AC010731.1-201ENST00000426087 846 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms