Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 DUSP21-201ENST00000339042 885 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
MTHFRP42898 RN7SKP25-201ENST00000362449 308 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 Y_RNA.209-201ENST00000364156 111 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 RPL11-201ENST00000374550 634 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 GAPDHP72-201ENST00000402643 1010 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 AC104455.1-201ENST00000417340 736 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 WRBP1-201ENST00000423352 334 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 RPL13AP7-201ENST00000425147 611 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC9.63□□□□□ -0.87
MTHFRP42898 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 AC097493.2-201ENST00000468675 780 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC9.63□□□□□ -0.87
MTHFRP42898 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC9.63□□□□□ -0.87
MTHFRP42898 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 AC079322.1-201ENST00000568345 1135 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 RN7SL474P-201ENST00000583485 301 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 MIR6892-201ENST00000612346 115 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 GPC6-202ENST00000617456 792 ntTSL 3 BASIC9.63□□□□□ -0.87
MTHFRP42898 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 AL365217.1-201ENST00000398578 2436 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 OTUD6B-205ENST00000615618 3434 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 THBS3-203ENST00000457183 2727 ntTSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 TXLNGY-203ENST00000445715 1915 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 SORD2P-202ENST00000561384 2498 ntTSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 HCAR1-201ENST00000432564 4768 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
MTHFRP42898 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
MTHFRP42898 RPSAP21-201ENST00000414293 885 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 NONOP2-201ENST00000414613 1231 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 AC002367.1-201ENST00000416765 405 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC9.62□□□□□ -0.87
MTHFRP42898 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC9.62□□□□□ -0.87
MTHFRP42898 AL354761.1-201ENST00000434190 526 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC9.62□□□□□ -0.87
MTHFRP42898 SDHDP2-201ENST00000436937 465 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 RPSAP27-201ENST00000442177 850 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 AL662890.2-201ENST00000457253 709 ntTSL 3 BASIC9.62□□□□□ -0.87
MTHFRP42898 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC9.62□□□□□ -0.87
MTHFRP42898 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC9.62□□□□□ -0.87
MTHFRP42898 AP003122.1-201ENST00000527402 755 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC9.62□□□□□ -0.87
MTHFRP42898 PPP3CB-AS1-211ENST00000600887 489 ntTSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 AL138999.1-201ENST00000612824 501 ntBASIC9.62□□□□□ -0.87
MTHFRP42898 STRADA-224ENST00000617949 705 ntTSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
MTHFRP42898 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 TMEM254-AS1-201ENST00000412298 3121 ntTSL 2 BASIC9.62□□□□□ -0.87
MTHFRP42898 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
MTHFRP42898 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
MTHFRP42898 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MTHFRP42898 SLC25A44-202ENST00000423538 3662 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms