RNA–Protein interactions for RNA: ENST00000417340.1

AC104455.1-201, humanhuman

BASIC

Gene AC104455.1, Length 736 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104455.1-201ENST00000417340 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
AC104455.1-201ENST00000417340 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
AC104455.1-201ENST00000417340 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
AC104455.1-201ENST00000417340 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
AC104455.1-201ENST00000417340 FOXD1Q16676 465 aa24.16■■□□□ 1.46
AC104455.1-201ENST00000417340 PLPPR3Q6T4P5 718 aa23.13■■□□□ 1.29
AC104455.1-201ENST00000417340 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
AC104455.1-201ENST00000417340 ADRA2BP18089 450 aa22.57■■□□□ 1.2
AC104455.1-201ENST00000417340 PIAS4Q8N2W9 510 aaPredicted RBP22.55■■□□□ 1.2
AC104455.1-201ENST00000417340 MSH5O43196 834 aa22.52■■□□□ 1.2
AC104455.1-201ENST00000417340 POTEDQ86YR6 584 aa21.89■■□□□ 1.09
AC104455.1-201ENST00000417340 NISCHQ9Y2I1 1504 aa21.52■■□□□ 1.04
AC104455.1-201ENST00000417340 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
AC104455.1-201ENST00000417340 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
AC104455.1-201ENST00000417340 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
AC104455.1-201ENST00000417340 PPP4R3CPQ6ZMV5 832 aa20.31■□□□□ 0.84
AC104455.1-201ENST00000417340 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
AC104455.1-201ENST00000417340 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
AC104455.1-201ENST00000417340 RNF216Q9NWF9 866 aaPredicted RBP19.7■□□□□ 0.74
AC104455.1-201ENST00000417340 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
AC104455.1-201ENST00000417340 ABCC9O60706 1549 aa19.56■□□□□ 0.72
AC104455.1-201ENST00000417340 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
AC104455.1-201ENST00000417340 NPM3O75607 178 aaKnown RBP19.29■□□□□ 0.68
AC104455.1-201ENST00000417340 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
AC104455.1-201ENST00000417340 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
AC104455.1-201ENST00000417340 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
AC104455.1-201ENST00000417340 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
AC104455.1-201ENST00000417340 KCNA4P22459 653 aa19■□□□□ 0.63
AC104455.1-201ENST00000417340 C1QBPQ07021 282 aaKnown RBP18.95■□□□□ 0.62
AC104455.1-201ENST00000417340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
AC104455.1-201ENST00000417340 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
AC104455.1-201ENST00000417340 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
AC104455.1-201ENST00000417340 SLC4A2P04920 1241 aa18.43■□□□□ 0.54
AC104455.1-201ENST00000417340 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
AC104455.1-201ENST00000417340 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
AC104455.1-201ENST00000417340 NACADO15069 1562 aa18.24■□□□□ 0.51
AC104455.1-201ENST00000417340 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
AC104455.1-201ENST00000417340 CAPN15O75808 1086 aa18.14■□□□□ 0.49
AC104455.1-201ENST00000417340 DSG3P32926 999 aa18.07■□□□□ 0.48
AC104455.1-201ENST00000417340 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
AC104455.1-201ENST00000417340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
AC104455.1-201ENST00000417340 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
AC104455.1-201ENST00000417340 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
AC104455.1-201ENST00000417340 APLP2Q06481 763 aa17.91■□□□□ 0.46
AC104455.1-201ENST00000417340 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
AC104455.1-201ENST00000417340 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
AC104455.1-201ENST00000417340 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
AC104455.1-201ENST00000417340 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
AC104455.1-201ENST00000417340 ZNF219Q9P2Y4 722 aaPredicted RBP17.84■□□□□ 0.45
AC104455.1-201ENST00000417340 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
AC104455.1-201ENST00000417340 ZCCHC6Q5VYS8 1495 aaKnown RBP17.79■□□□□ 0.44
AC104455.1-201ENST00000417340 ABCB7O75027 752 aa17.76■□□□□ 0.43
AC104455.1-201ENST00000417340 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
AC104455.1-201ENST00000417340 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
AC104455.1-201ENST00000417340 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
AC104455.1-201ENST00000417340 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
AC104455.1-201ENST00000417340 CC2D2AQ9P2K1 1620 aa17.56■□□□□ 0.4
AC104455.1-201ENST00000417340 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
AC104455.1-201ENST00000417340 ZBTB22O15209 634 aa17.5■□□□□ 0.39
AC104455.1-201ENST00000417340 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
AC104455.1-201ENST00000417340 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
AC104455.1-201ENST00000417340 POLA2Q14181 598 aa17.42■□□□□ 0.38
AC104455.1-201ENST00000417340 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
AC104455.1-201ENST00000417340 POTEHQ6S545 545 aa17.14■□□□□ 0.33
AC104455.1-201ENST00000417340 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
AC104455.1-201ENST00000417340 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
AC104455.1-201ENST00000417340 DNAJC5Q9H3Z4 198 aa16.95■□□□□ 0.3
AC104455.1-201ENST00000417340 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
AC104455.1-201ENST00000417340 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
AC104455.1-201ENST00000417340 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
AC104455.1-201ENST00000417340 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
AC104455.1-201ENST00000417340 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
AC104455.1-201ENST00000417340 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
AC104455.1-201ENST00000417340 NESP48681 1621 aa16.78■□□□□ 0.28
AC104455.1-201ENST00000417340 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
AC104455.1-201ENST00000417340 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
AC104455.1-201ENST00000417340 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
AC104455.1-201ENST00000417340 CUX2O14529 1486 aa16.73■□□□□ 0.27
AC104455.1-201ENST00000417340 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
AC104455.1-201ENST00000417340 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
AC104455.1-201ENST00000417340 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
AC104455.1-201ENST00000417340 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
AC104455.1-201ENST00000417340 FBLN2P98095 1184 aa16.66■□□□□ 0.26
AC104455.1-201ENST00000417340 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
AC104455.1-201ENST00000417340 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
AC104455.1-201ENST00000417340 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
AC104455.1-201ENST00000417340 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
AC104455.1-201ENST00000417340 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
AC104455.1-201ENST00000417340 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
AC104455.1-201ENST00000417340 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
AC104455.1-201ENST00000417340 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
AC104455.1-201ENST00000417340 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
AC104455.1-201ENST00000417340 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
AC104455.1-201ENST00000417340 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
AC104455.1-201ENST00000417340 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
AC104455.1-201ENST00000417340 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
AC104455.1-201ENST00000417340 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
AC104455.1-201ENST00000417340 WIZO95785 1651 aa16.42■□□□□ 0.22
AC104455.1-201ENST00000417340 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
AC104455.1-201ENST00000417340 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms